RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 M0R2N6 131 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 MED7O43513 233 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 ADCY3O60266 1144 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 CSDE1O75534 798 aaKnown RBP13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 HSPA4LO95757 839 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 GPC3P51654 580 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 CDH6P55285 790 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 ENOSF1Q7L5Y1 443 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 PRUNE1Q86TP1 453 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 ALG3Q92685 438 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 PWWP2AQ96N64 755 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 THTPAQ9BU02 230 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 UBN1Q9NPG3 1134 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 FBXO40Q9UH90 709 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 TLK1Q9UKI8 766 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 HOXA10P31260 410 aaPredicted RBP13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 CPA2P48052 419 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 DUOXA2Q1HG44 320 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 XKR3Q5GH77 459 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 MYLK4Q86YV6 388 aaPredicted RBP13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 SYTL5Q8TDW5 730 aaPredicted RBP13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 DCPSQ96C86 337 aaKnown RBP13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 HIF1AQ16665 826 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 GPAT2Q6NUI2 795 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 LLGL2Q6P1M3 1020 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 CCDC33Q8N5R6 958 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 TEX9Q8N6V9 391 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 AKT1S1Q96B36 256 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 ADA2Q9NZK5 511 aa13.18□□□□□ -0.3
SLC6A1-201ENST00000287766 GTPBP10A4D1E9 387 aaKnown RBP13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 AP1G2O75843 785 aa13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 TBXAS1P24557 533 aaPredicted RBP13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 ATXN3P54252 364 aaPredicted RBP13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 CAV1Q03135 178 aa13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 SLC20A2Q08357 652 aa13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 AGR3Q8TD06 166 aa13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 OTUD5Q96G74 571 aa13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 DEFB129Q9H1M3 183 aa13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 HOXC10Q9NYD6 342 aa13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 MARCOQ9UEW3 520 aaPredicted RBP13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 NR2E1Q9Y466 385 aa13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 ACTR2P61160 394 aa13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 B4GALNT2Q8NHY0 566 aa13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 MTBPQ96DY7 904 aa13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 CEP19Q96LK0 163 aa13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 SENP7Q9BQF6 1050 aa13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 CHST7Q9NS84 486 aa13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 CTNNAL1Q9UBT7 734 aa13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 CNOT7Q9UIV1 285 aaKnown RBP13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 A0A0A6YYK5 440 aaPredicted RBP13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 CST8O60676 142 aa13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 PIAS1O75925 651 aa13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 SUPT20HL1Q3ZLR7 823 aa13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 ZNF662Q6ZS27 426 aa13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 NAF1Q96HR8 494 aaKnown RBP13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 ZBTB45Q96K62 511 aaPredicted RBP13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 NEUROG2Q9H2A3 272 aa13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 SLC38A10Q9HBR0 1119 aa13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 MYH10P35580 1976 aa13.17□□□□□ -0.3
SLC6A1-201ENST00000287766 SLC26A4O43511 780 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 PSMD10O75832 226 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 DPEP1P16444 411 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 OVGP1Q12889 678 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 IQCKQ8N0W5 287 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 TEX13BQ9BXU2 312 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 MRPL4Q9BYD3 311 aaKnown RBP13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 KIF13AQ9H1H9 1805 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 CASZ1Q86V15 1759 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 FECHP22830 423 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 NR1H3Q13133 447 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 FAM47CQ5HY64 1035 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 FAXCQ5TGI0 409 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 LPAR1Q92633 364 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 MYOZ2Q9NPC6 264 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 SYCE1LA8MT33 242 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 DCDC2CA8MYV0 355 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 CCDC22O60826 627 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 PRKCIP41743 596 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 NEK2P51955 445 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 EIF3EP60228 445 aaKnown RBP13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 HIC1Q14526 733 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 ZCWPW2Q504Y3 356 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 SUGP1Q8IWZ8 645 aaKnown RBP13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 HSD17B14Q9BPX1 270 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 PDCD2LQ9BRP1 358 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 C10orf88Q9H8K7 445 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 AGO4Q9HCK5 861 aaKnown RBP13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 ERVK-5Q9HDB9 667 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 AJAP1Q9UKB5 411 aaPredicted RBP13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 ORC6Q9Y5N6 252 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 B2RBV5 119 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 S100BP04271 92 aaPredicted RBP13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 PRKCBP05771 671 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 RARGP13631 454 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 ITGB5P18084 799 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 TARSP26639 723 aaKnown RBP13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 SLC1A1P43005 524 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 COPS2P61201 443 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 STAT4Q14765 748 aa13.16□□□□□ -0.3
SLC6A1-201ENST00000287766 DPP9Q86TI2 863 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms