RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 USP27XA6NNY8 438 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 KCNA1Q09470 495 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 PGM5Q15124 567 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 ACOT1Q86TX2 421 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 PTPRN2Q92932 1015 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 TSSK1BQ9BXA7 367 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 CCDC78A2IDD5 438 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 VDRP11473 427 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 PCSK7Q16549 785 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 KRT80Q6KB66 452 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 RASGRP2Q7LDG7 609 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 MIB1Q86YT6 1006 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 FBXO32Q969P5 355 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 CLMNQ96JQ2 1002 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 WDR24Q96S15 920 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 TRIM17Q9Y577 477 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 PHF2O75151 1096 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 KITP10721 976 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 GIT2Q14161 759 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 TRIM45Q9H8W5 580 aaPredicted RBP19.4■□□□□ 0.7
PCDH1-201ENST00000287008 CCDC195A0A1B0GUA6 201 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 PPP1R3GB7ZBB8 358 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 M0QYT0 321 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 ITIH2P19823 946 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 INHBEP58166 350 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 PDAP1Q13442 181 aaKnown RBP19.4■□□□□ 0.7
PCDH1-201ENST00000287008 UCMAQ8WVF2 138 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 LZICQ8WZA0 190 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 SYN2Q92777 582 aaPredicted RBP19.4■□□□□ 0.7
PCDH1-201ENST00000287008 PDLIM2Q96JY6 352 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 GPR63Q9BZJ6 419 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 XPNPEP3Q9NQH7 507 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 DCTN4Q9UJW0 460 aa19.4■□□□□ 0.7
PCDH1-201ENST00000287008 EGFRP00533 1210 aa19.39■□□□□ 0.7
PCDH1-201ENST00000287008 F9P00740 461 aa19.39■□□□□ 0.7
PCDH1-201ENST00000287008 SYCP2LQ5T4T6 812 aa19.39■□□□□ 0.7
PCDH1-201ENST00000287008 ZNF280DQ6N043 979 aa19.39■□□□□ 0.7
PCDH1-201ENST00000287008 TRIM65Q6PJ69 517 aa19.39■□□□□ 0.7
PCDH1-201ENST00000287008 TSPAN17Q96FV3 270 aa19.39■□□□□ 0.7
PCDH1-201ENST00000287008 DDX27Q96GQ7 796 aaKnown RBP19.39■□□□□ 0.7
PCDH1-201ENST00000287008 ACTR5Q9H9F9 607 aaPredicted RBP19.39■□□□□ 0.7
PCDH1-201ENST00000287008 HMX1Q9NP08 348 aaPredicted RBP19.39■□□□□ 0.7
PCDH1-201ENST00000287008 ENTPD7Q9NQZ7 604 aa19.39■□□□□ 0.7
PCDH1-201ENST00000287008 KBTBD4Q9NVX7 518 aa19.39■□□□□ 0.7
PCDH1-201ENST00000287008 ARHGEF38Q9NXL2 777 aa19.39■□□□□ 0.7
PCDH1-201ENST00000287008 DSEQ9UL01 958 aa19.39■□□□□ 0.7
PCDH1-201ENST00000287008 SLIT1O75093 1534 aa19.39■□□□□ 0.69
PCDH1-201ENST00000287008 TCRBV5S4A2TA0A5A2 114 aa19.39■□□□□ 0.69
PCDH1-201ENST00000287008 ZNF286BP0CG31 522 aa19.39■□□□□ 0.69
PCDH1-201ENST00000287008 ARHGDIAP52565 204 aa19.39■□□□□ 0.69
PCDH1-201ENST00000287008 SMTNL2Q2TAL5 461 aa19.39■□□□□ 0.69
PCDH1-201ENST00000287008 DEFB128Q7Z7B8 93 aa19.39■□□□□ 0.69
PCDH1-201ENST00000287008 WDCPQ9H6R7 721 aa19.39■□□□□ 0.69
PCDH1-201ENST00000287008 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.39■□□□□ 0.69
PCDH1-201ENST00000287008 GYG2O15488 501 aa19.39■□□□□ 0.69
PCDH1-201ENST00000287008 ATMINO43313 823 aaPredicted RBP19.39■□□□□ 0.69
PCDH1-201ENST00000287008 DDX5P17844 614 aaKnown RBP19.39■□□□□ 0.69
PCDH1-201ENST00000287008 PPP2R2AP63151 447 aa19.39■□□□□ 0.69
PCDH1-201ENST00000287008 ZNF177Q13360 481 aaPredicted RBP19.39■□□□□ 0.69
PCDH1-201ENST00000287008 LCA5Q86VQ0 697 aa19.39■□□□□ 0.69
PCDH1-201ENST00000287008 DDIASQ8IXT1 998 aa19.39■□□□□ 0.69
PCDH1-201ENST00000287008 CALML6Q8TD86 181 aa19.39■□□□□ 0.69
PCDH1-201ENST00000287008 TRPM5Q9NZQ8 1165 aa19.39■□□□□ 0.69
PCDH1-201ENST00000287008 NWD1Q149M9 1564 aa19.39■□□□□ 0.69
PCDH1-201ENST00000287008 E2F6O75461 281 aa19.39■□□□□ 0.69
PCDH1-201ENST00000287008 LY6KQ17RY6 165 aa19.39■□□□□ 0.69
PCDH1-201ENST00000287008 TRMT10CQ7L0Y3 403 aaKnown RBP19.39■□□□□ 0.69
PCDH1-201ENST00000287008 IPMKQ8NFU5 416 aa19.39■□□□□ 0.69
PCDH1-201ENST00000287008 TMC2Q8TDI7 906 aa19.39■□□□□ 0.69
PCDH1-201ENST00000287008 SLC26A7Q8TE54 656 aa19.39■□□□□ 0.69
PCDH1-201ENST00000287008 BHMTQ93088 406 aa19.39■□□□□ 0.69
PCDH1-201ENST00000287008 DACT3Q96B18 629 aaPredicted RBP19.39■□□□□ 0.69
PCDH1-201ENST00000287008 H0Y626 953 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 ALDH2P05091 517 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 COBLL1Q53SF7 1204 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 HSP90AA5PQ58FG0 334 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 HIPK4Q8NE63 616 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 ENGASEQ8NFI3 743 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 CYFIP2Q96F07 1278 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 CGRRF1Q99675 332 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 DPP7Q9UHL4 492 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 MRFAP1Q9Y605 127 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 GUCY2CP25092 1073 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 GGCXP38435 758 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 GRIK4Q16099 956 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 ZNF720Q7Z2F6 126 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.38■□□□□ 0.69
PCDH1-201ENST00000287008 SYNDIG1Q9H7V2 258 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 GYPCP04921 128 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 ARFIP2P53365 341 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 ERVK-9P63128 1117 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 ERVK-24P63145 666 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 RASIP1Q5U651 963 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 GJB7Q6PEY0 223 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 ADCK2Q7Z695 626 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 TLK2Q86UE8 772 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 FOXP3Q9BZS1 431 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 GPRC5DQ9NZD1 345 aa19.38■□□□□ 0.69
PCDH1-201ENST00000287008 ZNF263O14978 683 aa19.37■□□□□ 0.69
PCDH1-201ENST00000287008 PQBP1O60828 265 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms