RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 TRIM4Q9C037 500 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 DCLRE1BQ9H816 532 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 PDLIM7Q9NR12 457 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 STOML1Q9UBI4 398 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 HAO1Q9UJM8 370 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 NAALADL1Q9UQQ1 740 aa10.97□□□□□ -0.65
SKA1-201ENST00000285116 TRAFD1O14545 582 aaPredicted RBP10.96□□□□□ -0.65
SKA1-201ENST00000285116 TARSP26639 723 aaKnown RBP10.96□□□□□ -0.65
SKA1-201ENST00000285116 DMP1Q13316 513 aaPredicted RBP10.96□□□□□ -0.65
SKA1-201ENST00000285116 DGKZQ13574 1117 aa10.96□□□□□ -0.65
SKA1-201ENST00000285116 MTMR1Q13613 665 aa10.96□□□□□ -0.65
SKA1-201ENST00000285116 ZYXQ15942 572 aaKnown RBP10.96□□□□□ -0.65
SKA1-201ENST00000285116 KYNUQ16719 465 aa10.96□□□□□ -0.65
SKA1-201ENST00000285116 LRRC38Q5VT99 294 aa10.96□□□□□ -0.65
SKA1-201ENST00000285116 GPD1LQ8N335 351 aa10.96□□□□□ -0.65
SKA1-201ENST00000285116 FAM136AQ96C01 138 aa10.96□□□□□ -0.65
SKA1-201ENST00000285116 BICD1Q96G01 975 aa10.96□□□□□ -0.65
SKA1-201ENST00000285116 CFAP57Q96MR6 1250 aa10.96□□□□□ -0.65
SKA1-201ENST00000285116 HERPUD2Q9BSE4 406 aa10.96□□□□□ -0.65
SKA1-201ENST00000285116 TBC1D10AQ9BXI6 508 aa10.96□□□□□ -0.65
SKA1-201ENST00000285116 MRPL47Q9HD33 250 aaKnown RBP10.96□□□□□ -0.65
SKA1-201ENST00000285116 DLGAP2Q9P1A6 1054 aa10.96□□□□□ -0.65
SKA1-201ENST00000285116 SMG5Q9UPR3 1016 aaKnown RBP10.96□□□□□ -0.65
SKA1-201ENST00000285116 STYXL1Q9Y6J8 313 aa10.96□□□□□ -0.65
SKA1-201ENST00000285116 SCINQ9Y6U3 715 aa10.96□□□□□ -0.65
SKA1-201ENST00000285116 FAM47DPA6NHR8 397 aa10.96□□□□□ -0.66
SKA1-201ENST00000285116 ASMTLO95671 621 aa10.96□□□□□ -0.66
SKA1-201ENST00000285116 C1QBPQ07021 282 aaKnown RBP10.96□□□□□ -0.66
SKA1-201ENST00000285116 MCL1Q07820 350 aa10.96□□□□□ -0.66
SKA1-201ENST00000285116 LAMB3Q13751 1172 aa10.96□□□□□ -0.66
SKA1-201ENST00000285116 TBC1D10BQ4KMP7 808 aaPredicted RBP10.96□□□□□ -0.66
SKA1-201ENST00000285116 LIN9Q5TKA1 542 aa10.96□□□□□ -0.66
SKA1-201ENST00000285116 MTMR14Q8NCE2 650 aa10.96□□□□□ -0.66
SKA1-201ENST00000285116 IL31RAQ8NI17 732 aa10.96□□□□□ -0.66
SKA1-201ENST00000285116 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.96□□□□□ -0.66
SKA1-201ENST00000285116 SLC7A6OSQ96CW6 309 aaPredicted RBP10.96□□□□□ -0.66
SKA1-201ENST00000285116 MAF1Q9H063 256 aa10.96□□□□□ -0.66
SKA1-201ENST00000285116 PIDD1Q9HB75 910 aa10.96□□□□□ -0.66
SKA1-201ENST00000285116 C1orf112Q9NSG2 853 aa10.96□□□□□ -0.66
SKA1-201ENST00000285116 GINM1Q9NU53 330 aa10.96□□□□□ -0.66
SKA1-201ENST00000285116 SCOCQ9UIL1 159 aa10.96□□□□□ -0.66
SKA1-201ENST00000285116 CCPG1Q9ULG6 757 aa10.96□□□□□ -0.66
SKA1-201ENST00000285116 CHKBQ9Y259 395 aa10.96□□□□□ -0.66
SKA1-201ENST00000285116 DRG1Q9Y295 367 aaKnown RBP10.96□□□□□ -0.66
SKA1-201ENST00000285116 LRCH1Q9Y2L9 728 aa10.96□□□□□ -0.66
SKA1-201ENST00000285116 DOCK5Q9H7D0 1870 aa10.96□□□□□ -0.66
SKA1-201ENST00000285116 SSC5DA1L4H1 1573 aa10.96□□□□□ -0.66
SKA1-201ENST00000285116 NVLO15381 856 aaKnown RBP10.95□□□□□ -0.66
SKA1-201ENST00000285116 MAP3K13O43283 966 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 DKC1O60832 514 aaKnown RBP eCLIP10.95□□□□□ -0.66
SKA1-201ENST00000285116 FDX1P10109 184 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 FOXN2P32314 431 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 ADCY8P40145 1251 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 RFC5P40937 340 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 PSMD6Q15008 389 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 UGCGQ16739 394 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 SPDYE2Q495Y8 402 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 OR52E8Q6IFG1 317 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 FAM47EQ6ZV65 393 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 FAM83AQ86UY5 434 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 TRABD2AQ86V40 505 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 CYP4X1Q8N118 509 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 ZNF398Q8TD17 642 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 ZNF333Q96JL9 665 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 KIAA1683Q9H0B3 1180 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 ACP6Q9NPH0 428 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 CHORDC1Q9UHD1 332 aaPredicted RBP10.95□□□□□ -0.66
SKA1-201ENST00000285116 R3HDM2Q9Y2K5 976 aaKnown RBP10.95□□□□□ -0.66
SKA1-201ENST00000285116 WDR46O15213 610 aaKnown RBP10.95□□□□□ -0.66
SKA1-201ENST00000285116 HNRNPCL1O60812 293 aaKnown RBP10.95□□□□□ -0.66
SKA1-201ENST00000285116 RNF8O76064 485 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 CETPP11597 493 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 ACO1P21399 889 aaKnown RBP10.95□□□□□ -0.66
SKA1-201ENST00000285116 VHLP40337 213 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 RNASELQ05823 741 aaKnown RBP10.95□□□□□ -0.66
SKA1-201ENST00000285116 CBLBQ13191 982 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 CUL3Q13618 768 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 MOGSQ13724 837 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 IZUMO3Q5VZ72 239 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 NSMFQ6X4W1 530 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 SYTL5Q8TDW5 730 aaPredicted RBP10.95□□□□□ -0.66
SKA1-201ENST00000285116 LPAR1Q92633 364 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 IFT43Q96FT9 208 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 GORASP1Q9BQQ3 440 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 OSBPL8Q9BZF1 889 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 PGAP2Q9UHJ9 254 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 SLC24A2Q9UI40 661 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 HTTP42858 3142 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 DENND3A2RUS2 1198 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 H0Y3Z8 333 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 ZBED4O75132 1171 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 STBD1O95210 358 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 PIGRP01833 764 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 SKIP12755 728 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 RRM1P23921 792 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 GCAP28676 217 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 MAGEA4P43358 317 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 NSFP46459 744 aaKnown RBP10.95□□□□□ -0.66
SKA1-201ENST00000285116 DYNC1I2Q13409 638 aaKnown RBP10.95□□□□□ -0.66
SKA1-201ENST00000285116 ZACNQ401N2 412 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms