RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 PCYT2Q99447 389 aa9.51□□□□□ -0.89
SEC16A-201ENST00000277537 RRN3P2A6NIE6 340 aa9.51□□□□□ -0.89
SEC16A-201ENST00000277537 ARF4P18085 180 aaPredicted RBP9.51□□□□□ -0.89
SEC16A-201ENST00000277537 SLC1A1P43005 524 aa9.51□□□□□ -0.89
SEC16A-201ENST00000277537 CDH6P55285 790 aa9.51□□□□□ -0.89
SEC16A-201ENST00000277537 GPS1Q13098 491 aa9.51□□□□□ -0.89
SEC16A-201ENST00000277537 ATP13A4Q4VNC1 1196 aa9.51□□□□□ -0.89
SEC16A-201ENST00000277537 CCDC38Q502W7 563 aa9.51□□□□□ -0.89
SEC16A-201ENST00000277537 PAN2Q504Q3 1202 aaKnown RBP9.51□□□□□ -0.89
SEC16A-201ENST00000277537 NOTUMQ6P988 496 aa9.51□□□□□ -0.89
SEC16A-201ENST00000277537 PALM2Q8IXS6 379 aa9.51□□□□□ -0.89
SEC16A-201ENST00000277537 TMEM192Q8IY95 271 aa9.51□□□□□ -0.89
SEC16A-201ENST00000277537 FBXO25Q8TCJ0 367 aa9.51□□□□□ -0.89
SEC16A-201ENST00000277537 ARL8AQ96BM9 186 aa9.51□□□□□ -0.89
SEC16A-201ENST00000277537 ISCUQ9H1K1 167 aa9.51□□□□□ -0.89
SEC16A-201ENST00000277537 SMYD3Q9H7B4 428 aa9.51□□□□□ -0.89
SEC16A-201ENST00000277537 TMEM51Q9NW97 253 aa9.51□□□□□ -0.89
SEC16A-201ENST00000277537 ADAMTS5Q9UNA0 930 aa9.51□□□□□ -0.89
SEC16A-201ENST00000277537 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.5□□□□□ -0.89
SEC16A-201ENST00000277537 MCF2LO15068 1137 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 SDC4P31431 198 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 MAN1A1P33908 653 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 MAGOHP61326 146 aaKnown RBP9.5□□□□□ -0.89
SEC16A-201ENST00000277537 DHX34Q14147 1143 aaKnown RBP9.5□□□□□ -0.89
SEC16A-201ENST00000277537 ZC3H3Q8IXZ2 948 aaKnown RBP9.5□□□□□ -0.89
SEC16A-201ENST00000277537 MINDY3Q9H8M7 445 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 MLXIPLQ9NP71 852 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 NKIRAS1Q9NYS0 192 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 MAGED2Q9UNF1 606 aaPredicted RBP9.5□□□□□ -0.89
SEC16A-201ENST00000277537 FAM187AA6NFU0 413 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 RASGRF2O14827 1237 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 C4BPAP04003 597 aaKnown RBP9.5□□□□□ -0.89
SEC16A-201ENST00000277537 COILP38432 576 aaPredicted RBP9.5□□□□□ -0.89
SEC16A-201ENST00000277537 RPL7AP62424 266 aaKnown RBP9.5□□□□□ -0.89
SEC16A-201ENST00000277537 RNASELQ05823 741 aaKnown RBP9.5□□□□□ -0.89
SEC16A-201ENST00000277537 BBS9Q3SYG4 887 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 C1orf228Q6PIY5 440 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 B4GALNT4Q76KP1 1039 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 TAS1R3Q7RTX0 852 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 SIX6OS1Q8N1H7 587 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 TSEN2Q8NCE0 465 aaKnown RBP9.5□□□□□ -0.89
SEC16A-201ENST00000277537 CCNYQ8ND76 341 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 APOBEC3GQ9HC16 384 aaKnown RBP9.5□□□□□ -0.89
SEC16A-201ENST00000277537 CDK5RAP2Q96SN8 1893 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 GPR25O00155 361 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 RPS6KA5O75582 802 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 PGK1P00558 417 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 ATP2A2P16615 1042 aaKnown RBP9.5□□□□□ -0.89
SEC16A-201ENST00000277537 RGS2P41220 211 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 ARPP19P56211 112 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 LMNB2Q03252 620 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 C9orf72Q96LT7 481 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 RUNDC3BQ96NL0 473 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 IQCGQ9H095 443 aaKnown RBP9.5□□□□□ -0.89
SEC16A-201ENST00000277537 SAYSD1Q9NPB0 183 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 ASNSD1Q9NWL6 643 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 NR2E1Q9Y466 385 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.5□□□□□ -0.89
SEC16A-201ENST00000277537 F8VP50 259 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 RARAP10276 462 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 CHRNB2P17787 502 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 CPT1AP50416 773 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 ARSEP51690 589 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 NDST1P52848 882 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 GUCY1A3Q02108 690 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 PTPN11Q06124 597 aaPredicted RBP9.5□□□□□ -0.89
SEC16A-201ENST00000277537 SLMAPQ14BN4 828 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 MTHFD1LQ6UB35 978 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 CXCL17Q6UXB2 119 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 MICALCLQ6ZW33 695 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 CCDC33Q8N5R6 958 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 LRRC57Q8N9N7 239 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 HOMER3Q9NSC5 361 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 KCNH4Q9UQ05 1017 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 MAD1L1Q9Y6D9 718 aa9.5□□□□□ -0.89
SEC16A-201ENST00000277537 C17orf102A2RUQ5 167 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 MYO1CO00159 1063 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 PROSCO94903 275 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 SMPD1P17405 629 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 HSD17B3P37058 310 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 GOLGA7BQ2TAP0 167 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 IZUMO3Q5VZ72 239 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 SPRYD7Q5W111 196 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 IQSEC1Q6DN90 963 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 C11orf63Q6NUN7 778 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 TAOK1Q7L7X3 1001 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 CCDC13Q8IYE1 715 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 OTUD6BQ8N6M0 293 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 ATL2Q8NHH9 583 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 HES6Q96HZ4 224 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 VIPAS39Q9H9C1 493 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 CST8O60676 142 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 CFHP08603 1231 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 YWHAGP61981 247 aaKnown RBP eCLIP9.49□□□□□ -0.89
SEC16A-201ENST00000277537 NME3Q13232 169 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 MFSD10Q14728 455 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 SMAD1Q15797 465 aaKnown RBP9.49□□□□□ -0.89
SEC16A-201ENST00000277537 C1orf220Q5T0J3 134 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 LMO3Q8TAP4 145 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 MAML3Q96JK9 1138 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms