RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 FKBP3Q00688 224 aaKnown RBP16.43■□□□□ 0.22
UBR3-201ENST00000272793 IFNL3Q8IZI9 196 aa16.43■□□□□ 0.22
UBR3-201ENST00000272793 CEBPAP49715 358 aaPredicted RBP16.43■□□□□ 0.22
UBR3-201ENST00000272793 MMGT1Q8N4V1 131 aa16.43■□□□□ 0.22
UBR3-201ENST00000272793 SRPRBQ9Y5M8 271 aaKnown RBP16.43■□□□□ 0.22
UBR3-201ENST00000272793 ABCB1P08183 1280 aaPredicted RBP16.43■□□□□ 0.22
UBR3-201ENST00000272793 POLD4Q9HCU8 107 aa16.43■□□□□ 0.22
UBR3-201ENST00000272793 TMCO1Q9UM00 188 aa16.43■□□□□ 0.22
UBR3-201ENST00000272793 IL2RBP14784 551 aa16.43■□□□□ 0.22
UBR3-201ENST00000272793 ALDH1B1P30837 517 aa16.43■□□□□ 0.22
UBR3-201ENST00000272793 SERPINB8P50452 374 aa16.43■□□□□ 0.22
UBR3-201ENST00000272793 TSPAN17Q96FV3 270 aa16.43■□□□□ 0.22
UBR3-201ENST00000272793 SLC9A2Q9UBY0 812 aa16.43■□□□□ 0.22
UBR3-201ENST00000272793 ZNF432O94892 652 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 SERPINA3P01011 423 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 PEX5P50542 639 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 PRRG3Q9BZD7 231 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 HDAC6Q9UBN7 1215 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 SLC9A8Q9Y2E8 581 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 DIS3Q9Y2L1 958 aaKnown RBP16.42■□□□□ 0.22
UBR3-201ENST00000272793 ADCY9O60503 1353 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 ARSEP51690 589 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 GFPT1Q06210 699 aaPredicted RBP16.42■□□□□ 0.22
UBR3-201ENST00000272793 DNAJC9Q8WXX5 260 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 ART5Q96L15 291 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 KCNK16Q96T55 309 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 FGFR4P22455 802 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 ZNF579Q8NAF0 562 aaKnown RBP16.42■□□□□ 0.22
UBR3-201ENST00000272793 ARHGEF38Q9NXL2 777 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 POGZQ7Z3K3 1410 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 ULK1O75385 1050 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 BCL10O95999 233 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 NCK1P16333 377 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 CBX5P45973 191 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.42■□□□□ 0.22
UBR3-201ENST00000272793 CARMIL3Q8ND23 1372 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 MED26O95402 600 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 CYBBP04839 570 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 ATG16L2Q8NAA4 619 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 C19orf44Q9H6X5 657 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 ATAD2BQ9ULI0 1458 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 TRIM64BA6NI03 449 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 RGS10O43665 173 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 TRAF2Q12933 501 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 TTC29Q8NA56 475 aaPredicted RBP16.42■□□□□ 0.22
UBR3-201ENST00000272793 PLBD2Q8NHP8 589 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 UBA2Q9UBT2 640 aaPredicted RBP16.42■□□□□ 0.22
UBR3-201ENST00000272793 ATP6V1B2P21281 511 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 IST1P53990 364 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 KPNB1Q14974 876 aaKnown RBP16.42■□□□□ 0.22
UBR3-201ENST00000272793 EFHC2Q5JST6 749 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 IRAK1BP1Q5VVH5 260 aa16.42■□□□□ 0.22
UBR3-201ENST00000272793 UTP15Q8TED0 518 aaKnown RBP16.42■□□□□ 0.22
UBR3-201ENST00000272793 NCK2O43639 380 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 KRT34O76011 436 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 DHX34Q14147 1143 aaKnown RBP16.41■□□□□ 0.22
UBR3-201ENST00000272793 ATP13A5Q4VNC0 1218 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 AIF1LQ9BQI0 150 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 CHKBQ9Y259 395 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 KIF24Q5T7B8 1368 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 RNMTO43148 476 aaKnown RBP16.41■□□□□ 0.22
UBR3-201ENST00000272793 GCFC2P16383 781 aaKnown RBP16.41■□□□□ 0.22
UBR3-201ENST00000272793 RHOT2Q8IXI1 618 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 RNF25Q96BH1 459 aaPredicted RBP16.41■□□□□ 0.22
UBR3-201ENST00000272793 EFR3BQ9Y2G0 817 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 FGAP02671 866 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 FGRP09769 529 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 ATP1A3P13637 1013 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 C1orf189Q5VU69 101 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 KIF2BQ8N4N8 673 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 IRF1P10914 325 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 IL31Q6EBC2 164 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 RALAP11233 206 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 RGS4P49798 205 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 KCNQ4P56696 695 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 VEPH1Q14D04 833 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 ABCB5Q2M3G0 1257 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 ZNF667Q5HYK9 610 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 OXCT2Q9BYC2 517 aaPredicted RBP16.41■□□□□ 0.22
UBR3-201ENST00000272793 A1BGP04217 495 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 PAICSP22234 425 aaKnown RBP16.41■□□□□ 0.22
UBR3-201ENST00000272793 HIST2H2ACQ16777 129 aaPredicted RBP16.41■□□□□ 0.22
UBR3-201ENST00000272793 HIST2H2AA3Q6FI13 130 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 ERICH5Q6P6B1 374 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 TPD52L3Q96J77 140 aa16.41■□□□□ 0.22
UBR3-201ENST00000272793 TPD52L2O43399 206 aaKnown RBP16.4■□□□□ 0.22
UBR3-201ENST00000272793 CNPP09543 421 aaKnown RBP16.4■□□□□ 0.22
UBR3-201ENST00000272793 PDIA3P30101 505 aaKnown RBP16.4■□□□□ 0.22
UBR3-201ENST00000272793 GALNT17Q6IS24 598 aa16.4■□□□□ 0.22
UBR3-201ENST00000272793 TRIM72Q6ZMU5 477 aa16.4■□□□□ 0.22
UBR3-201ENST00000272793 CHPFQ8IZ52 775 aa16.4■□□□□ 0.22
UBR3-201ENST00000272793 RBBP8Q99708 897 aa16.4■□□□□ 0.22
UBR3-201ENST00000272793 COPS7BQ9H9Q2 264 aaPredicted RBP16.4■□□□□ 0.22
UBR3-201ENST00000272793 CBFA2T3O75081 653 aa16.4■□□□□ 0.22
UBR3-201ENST00000272793 GNAT1P11488 350 aa16.4■□□□□ 0.22
UBR3-201ENST00000272793 GSSP48637 474 aa16.4■□□□□ 0.22
UBR3-201ENST00000272793 BFARQ9NZS9 450 aa16.4■□□□□ 0.22
UBR3-201ENST00000272793 SH3TC1Q8TE82 1336 aa16.4■□□□□ 0.22
UBR3-201ENST00000272793 TEX46H3BTG2 121 aa16.4■□□□□ 0.22
UBR3-201ENST00000272793 H2AFYO75367 372 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms