RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 RGS9BPQ6ZS82 235 aa12.15□□□□□ -0.47
CLSTN3-201ENST00000266546 APLFQ8IW19 511 aaPredicted RBP12.15□□□□□ -0.47
CLSTN3-201ENST00000266546 CENPTQ96BT3 561 aa12.15□□□□□ -0.47
CLSTN3-201ENST00000266546 ANKRD27Q96NW4 1050 aa12.15□□□□□ -0.47
CLSTN3-201ENST00000266546 CYP39A1Q9NYL5 469 aa12.15□□□□□ -0.47
CLSTN3-201ENST00000266546 PHTF1Q9UMS5 762 aa12.15□□□□□ -0.47
CLSTN3-201ENST00000266546 NFASCO94856 1347 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 RSPH10B2B2RC85 870 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 ATMINO43313 823 aaPredicted RBP12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 STRNO43815 780 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 RSPH10BP0C881 870 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 ARSEP51690 589 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 QPCTQ16769 361 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 KCNK18Q7Z418 384 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 RASSF3Q86WH2 238 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 AP5M1Q9H0R1 490 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 DCLRE1BQ9H816 532 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 M0QZ92 97 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 IRF6O14896 467 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 KITP10721 976 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 MAGEA4P43358 317 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 SLC12A3P55017 1021 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 ACTR2P61160 394 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 TMEM132BQ14DG7 1078 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 P3H1Q32P28 736 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 DARS2Q6PI48 645 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 LBX2Q6XYB7 198 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 PCGF5Q86SE9 256 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 PASD1Q8IV76 773 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 SLC30A5Q8TAD4 765 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 BAP1Q92560 729 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 PRCCQ92733 491 aaPredicted RBP12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 DTNBP1Q96EV8 351 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 MAGEB18Q96M61 343 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 MIS12Q9H081 205 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 ASPHQ12797 758 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 RCN1Q15293 331 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 RIBC1Q8N443 379 aaPredicted RBP12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 SCFD1Q8WVM8 642 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 CFAP36Q96G28 342 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 LRGUKQ96M69 825 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 SENP7Q9BQF6 1050 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 SGIP1Q9BQI5 828 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 SMARCAD1Q9H4L7 1026 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 COMMD10Q9Y6G5 202 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 SNCAIPQ9Y6H5 919 aa12.14□□□□□ -0.47
CLSTN3-201ENST00000266546 GRIN2DO15399 1336 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 FRMPD4Q14CM0 1322 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 SUPT20HL2P0C7V6 817 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 ACADSP16219 412 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 XRCC4Q13426 336 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 GEN1Q17RS7 908 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 KRT39Q6A163 491 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 NT5DC3Q86UY8 548 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 MAP7D3Q8IWC1 876 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 SHCBP1Q8NEM2 672 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 SLC26A7Q8TE54 656 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 PSPC1Q8WXF1 523 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 CLEC4DQ8WXI8 215 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 L3MBTL3Q96JM7 780 aaPredicted RBP12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 HSD17B14Q9BPX1 270 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 TSSK1BQ9BXA7 367 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 NEU2Q9Y3R4 380 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 hCG_2014768A0A024R1R8 64 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 TLR3O15455 904 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 SNX3O60493 162 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 LYPLA2O95372 231 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 TXNP10599 105 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 EFNA5P52803 228 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 HUNKP57058 714 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 KDSRQ06136 332 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 AFAP1L2Q8N4X5 818 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 ATXN2LQ8WWM7 1075 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 SPATA33Q96N06 139 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 RUSC1Q9BVN2 902 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 VAV3Q9UKW4 847 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 DENND3A2RUS2 1198 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 EML1O00423 815 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 RIPK2O43353 540 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 UBTFL6P0CB48 400 aaPredicted RBP12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 RFC1P35251 1148 aaPredicted RBP12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 ARL1P40616 181 aaPredicted RBP12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 CASP4P49662 377 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 KCNJ2P63252 427 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 PRKCEQ02156 737 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 MAP1SQ66K74 1059 aaPredicted RBP12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 ANKMY2Q8IV38 441 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 PURBQ96QR8 312 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 ADPGKQ9BRR6 497 aa12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 APOBEC2Q9Y235 224 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-201ENST00000266546 CAPN9O14815 690 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 SLC26A2P50443 739 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 PSMC6P62333 389 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 ESRRGP62508 458 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 MED21Q13503 144 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 HIF1AQ16665 826 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 RABGAP1LQ5R372 815 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 LVRNQ6Q4G3 990 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 TRIML2Q8N7C3 387 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms