RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 ALLCQ8N6M5 410 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 CCHCR1Q8TD31 782 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 FBXO41Q8TF61 875 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 MINDY3Q9H8M7 445 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 DDX56Q9NY93 547 aaKnown RBP11.82□□□□□ -0.52
MSH3-201ENST00000265081 CYTH4Q9UIA0 394 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 CITO14578 2027 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 hCG_1818297A0A087WSY0 165 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 TTC4O95801 387 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 OAS1P00973 400 aaKnown RBP11.82□□□□□ -0.52
MSH3-201ENST00000265081 CDKN2BP42772 138 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 RPL7AP62424 266 aaKnown RBP11.82□□□□□ -0.52
MSH3-201ENST00000265081 NFX1Q12986 1120 aaKnown RBP11.82□□□□□ -0.52
MSH3-201ENST00000265081 KYAT1Q16773 422 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 EAPPQ56P03 285 aaPredicted RBP11.82□□□□□ -0.52
MSH3-201ENST00000265081 GADL1Q6ZQY3 521 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 ZCCHC9Q8N567 271 aaKnown RBP11.82□□□□□ -0.52
MSH3-201ENST00000265081 ARFGAP1Q8N6T3 406 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 SIGLEC16A6NMB1 481 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 ITGAVP06756 1048 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 POTEJP0CG39 1038 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 IRX3P78415 501 aaPredicted RBP11.82□□□□□ -0.52
MSH3-201ENST00000265081 RNF149Q8NC42 400 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 PPTC7Q8NI37 304 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 ACTL7BQ9Y614 415 aa11.82□□□□□ -0.52
MSH3-201ENST00000265081 RAD23BP54727 409 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 YWHAEP62258 255 aaKnown RBP11.81□□□□□ -0.52
MSH3-201ENST00000265081 LACTB2Q53H82 288 aaPredicted RBP11.81□□□□□ -0.52
MSH3-201ENST00000265081 PIGWQ7Z7B1 504 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 XPO6Q96QU8 1125 aaKnown RBP11.81□□□□□ -0.52
MSH3-201ENST00000265081 SDCBP2Q9H190 292 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 PRMT7Q9NVM4 692 aaPredicted RBP11.81□□□□□ -0.52
MSH3-201ENST00000265081 STRIP2Q9ULQ0 834 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 TSC2P49815 1807 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 ASB14A6NK59 587 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 NDUFAB1O14561 156 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 TRIM66O15016 1216 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 ENDOD1O94919 500 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 TCF4P15884 667 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 ITGA8P53708 1063 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 LMNB2Q03252 620 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 SEZ6Q53EL9 994 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 TRIM50Q86XT4 487 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 TDRPQ86YL5 185 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 SULF1Q8IWU6 871 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 TMEM35BQ8NCS4 154 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 SLC35B2Q8TB61 432 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 ATG4AQ8WYN0 398 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 PDZD7Q9H5P4 517 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 DDX20Q9UHI6 824 aaKnown RBP11.81□□□□□ -0.52
MSH3-201ENST00000265081 CILPO75339 1184 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 CAPN15O75808 1086 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 PGK2P07205 417 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 OSBPP22059 807 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 FGFR4P22455 802 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 ACAP1Q15027 740 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 NT5DC4Q86YG4 428 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 MCRS1Q96EZ8 462 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 SPATA33Q96N06 139 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 IMPG2Q9BZV3 1241 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 STMN4Q9H169 189 aaPredicted RBP11.81□□□□□ -0.52
MSH3-201ENST00000265081 CYP3A43Q9HB55 503 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 GAS8O95995 478 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 SEC24CP53992 1094 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 DAB2IPQ5VWQ8 1189 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 SPOCD1Q6ZMY3 1216 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 PASD1Q8IV76 773 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 C1orf127Q8N9H9 656 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 OTUD5Q96G74 571 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 ASB7Q9H672 318 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 VTA1Q9NP79 307 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 PTPN22Q9Y2R2 807 aa11.81□□□□□ -0.52
MSH3-201ENST00000265081 FARP1Q9Y4F1 1045 aaPredicted RBP11.81□□□□□ -0.52
MSH3-201ENST00000265081 B4GALT5O43286 388 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 BRD2P25440 801 aaKnown RBP11.8□□□□□ -0.52
MSH3-201ENST00000265081 TMOD1P28289 359 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 ARSEP51690 589 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 SLC18A1P54219 525 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 IRF5Q13568 498 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 QPCTQ16769 361 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 TMEM63BQ5T3F8 832 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 EEF1DP3Q658K8 133 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 CEP128Q6ZU80 1094 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 FBXO16Q8IX29 292 aaPredicted RBP11.8□□□□□ -0.52
MSH3-201ENST00000265081 CCDC89Q8N998 374 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 SLC4A11Q8NBS3 891 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 EPS8L3Q8TE67 593 aaKnown RBP11.8□□□□□ -0.52
MSH3-201ENST00000265081 USP6NLQ92738 828 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 C16orf70Q9BSU1 422 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 RASSF4Q9H2L5 321 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 ERAP1Q9NZ08 941 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 NINJ2Q9NZG7 142 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 MORF4L1Q9UBU8 362 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 UTRNP46939 3433 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 GCAP28676 217 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 IFI35P80217 286 aaPredicted RBP11.8□□□□□ -0.52
MSH3-201ENST00000265081 CALCOCO2Q13137 446 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 TTLL4Q14679 1199 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 C2CD6Q53TS8 623 aa11.8□□□□□ -0.52
MSH3-201ENST00000265081 CYP4V2Q6ZWL3 525 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms