RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 GBP7Q8N8V2 638 aaPredicted RBP20.88■□□□□ 0.93
CSPG5-201ENST00000264723 UBA3Q8TBC4 463 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 SENP7Q9BQF6 1050 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 SPATC1LQ9H0A9 340 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 ZFP69BQ9UJL9 534 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 HAO1Q9UJM8 370 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 C4AP0C0L4 1744 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 C4BP0C0L5 1744 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 MYH7P12883 1935 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 P4HA2O15460 535 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 GH1P01241 217 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 JAM2P57087 298 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 C11orf63Q6NUN7 778 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 POTEAQ6S8J7 498 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 RPAINQ86UA6 219 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 CCL15-CCL14A0A0B4J2E2 113 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 FSBPO95073 299 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 RARBP10826 455 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 CDH6P55285 790 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 STAT4Q14765 748 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 CCL15Q16663 113 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 FKBP1CQ5VVH2 108 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 BTNL9Q6UXG8 535 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 MCOLN2Q8IZK6 566 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 OR6J1Q8NGC5 347 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 TRPM4Q8TD43 1214 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 EGFRP00533 1210 aa20.87■□□□□ 0.93
CSPG5-201ENST00000264723 ELF1P32519 619 aa20.87■□□□□ 0.93
CSPG5-201ENST00000264723 DSTYKQ6XUX3 929 aa20.87■□□□□ 0.93
CSPG5-201ENST00000264723 SIX6OS1Q8N1H7 587 aa20.87■□□□□ 0.93
CSPG5-201ENST00000264723 N4BP2Q86UW6 1770 aaPredicted RBP20.87■□□□□ 0.93
CSPG5-201ENST00000264723 MYH15Q9Y2K3 1946 aa20.87■□□□□ 0.93
CSPG5-201ENST00000264723 TOM1L1O75674 476 aa20.87■□□□□ 0.93
CSPG5-201ENST00000264723 CIB2O75838 187 aa20.87■□□□□ 0.93
CSPG5-201ENST00000264723 ARL4AP40617 200 aa20.87■□□□□ 0.93
CSPG5-201ENST00000264723 CAV1Q03135 178 aa20.87■□□□□ 0.93
CSPG5-201ENST00000264723 BMT2Q1RMZ1 405 aa20.87■□□□□ 0.93
CSPG5-201ENST00000264723 EXOC3L1Q86VI1 746 aa20.87■□□□□ 0.93
CSPG5-201ENST00000264723 ACAP3Q96P50 834 aa20.87■□□□□ 0.93
CSPG5-201ENST00000264723 RNF19AQ9NV58 838 aa20.87■□□□□ 0.93
CSPG5-201ENST00000264723 R3HDM2Q9Y2K5 976 aaKnown RBP20.87■□□□□ 0.93
CSPG5-201ENST00000264723 SRCAPQ6ZRS2 3230 aa20.87■□□□□ 0.93
CSPG5-201ENST00000264723 CTSHP09668 335 aa20.87■□□□□ 0.93
CSPG5-201ENST00000264723 ESRRAP11474 423 aaPredicted RBP20.87■□□□□ 0.93
CSPG5-201ENST00000264723 RAD23BP54727 409 aa20.87■□□□□ 0.93
CSPG5-201ENST00000264723 KCNJ2P63252 427 aa20.87■□□□□ 0.93
CSPG5-201ENST00000264723 VSIG10LQ86VR7 867 aa20.87■□□□□ 0.93
CSPG5-201ENST00000264723 FEZF2Q8TBJ5 459 aa20.87■□□□□ 0.93
CSPG5-201ENST00000264723 PIN4Q9Y237 131 aaKnown RBP20.87■□□□□ 0.93
CSPG5-201ENST00000264723 BTNL10A8MVZ5 291 aa20.86■□□□□ 0.93
CSPG5-201ENST00000264723 PIK3CDO00329 1044 aa20.86■□□□□ 0.93
CSPG5-201ENST00000264723 BANF1O75531 89 aa20.86■□□□□ 0.93
CSPG5-201ENST00000264723 KRT4P19013 534 aa20.86■□□□□ 0.93
CSPG5-201ENST00000264723 CPA2P48052 419 aa20.86■□□□□ 0.93
CSPG5-201ENST00000264723 ITKQ08881 620 aa20.86■□□□□ 0.93
CSPG5-201ENST00000264723 CLEC16AQ2KHT3 1053 aa20.86■□□□□ 0.93
CSPG5-201ENST00000264723 LVRNQ6Q4G3 990 aa20.86■□□□□ 0.93
CSPG5-201ENST00000264723 CCDC125Q86Z20 511 aa20.86■□□□□ 0.93
CSPG5-201ENST00000264723 CNPY4Q8N129 248 aa20.86■□□□□ 0.93
CSPG5-201ENST00000264723 PPARGC1AQ9UBK2 798 aaKnown RBP20.86■□□□□ 0.93
CSPG5-201ENST00000264723 ZC3H4Q9UPT8 1303 aaKnown RBP20.86■□□□□ 0.93
CSPG5-201ENST00000264723 VTNP04004 478 aa20.86■□□□□ 0.93
CSPG5-201ENST00000264723 SLC1A1P43005 524 aa20.86■□□□□ 0.93
CSPG5-201ENST00000264723 AMHR2Q16671 573 aa20.86■□□□□ 0.93
CSPG5-201ENST00000264723 DNAAF3Q8N9W5 541 aa20.86■□□□□ 0.93
CSPG5-201ENST00000264723 TMEM237Q96Q45 408 aa20.86■□□□□ 0.93
CSPG5-201ENST00000264723 COL20A1Q9P218 1284 aa20.86■□□□□ 0.93
CSPG5-201ENST00000264723 YY1P25490 414 aa20.86■□□□□ 0.93
CSPG5-201ENST00000264723 PDE1BQ01064 536 aa20.86■□□□□ 0.93
CSPG5-201ENST00000264723 SNAPC2Q13487 334 aa20.86■□□□□ 0.93
CSPG5-201ENST00000264723 CUL2Q13617 745 aa20.86■□□□□ 0.93
CSPG5-201ENST00000264723 NUDCD1Q96RS6 583 aa20.86■□□□□ 0.93
CSPG5-201ENST00000264723 ROPN1BQ9BZX4 212 aaPredicted RBP20.86■□□□□ 0.93
CSPG5-201ENST00000264723 ROPN1Q9HAT0 212 aaPredicted RBP20.86■□□□□ 0.93
CSPG5-201ENST00000264723 E2F8A0AVK6 867 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 SDC4P31431 198 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 TMPRSS15P98073 1019 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 SGSM1Q2NKQ1 1148 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 IER5Q5VY09 327 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 MAP1SQ66K74 1059 aaPredicted RBP20.85■□□□□ 0.93
CSPG5-201ENST00000264723 TRIM72Q6ZMU5 477 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 ZNF572Q7Z3I7 529 aaPredicted RBP20.85■□□□□ 0.93
CSPG5-201ENST00000264723 RASGEF1CQ8N431 466 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 FAM71DQ8N9W8 422 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 SERPINB12Q96P63 405 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 DNPEPQ9ULA0 475 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 TJP1Q07157 1748 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 CYP2C8P10632 490 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 GCLCP48506 637 aaPredicted RBP20.85■□□□□ 0.93
CSPG5-201ENST00000264723 MYL6P60660 151 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 SARNPP82979 210 aaKnown RBP20.85■□□□□ 0.93
CSPG5-201ENST00000264723 TNFAIP2Q03169 654 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 ERO1BQ86YB8 467 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 NINJ2Q9NZG7 142 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 GYG2O15488 501 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 ITGB3P05106 788 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 COPS2P61201 443 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 GEN1Q17RS7 908 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 DAW1Q8N136 415 aa20.85■□□□□ 0.93
CSPG5-201ENST00000264723 RDM1Q8NG50 284 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms