RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 NFX1Q12986 1120 aaKnown RBP12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 DHDDSQ86SQ9 333 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 HORMAD1Q86X24 394 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 TLCD1Q96CP7 247 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 MRPS26Q9BYN8 205 aaKnown RBP12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 DUX4Q9UBX2 424 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 M0R3G1 203 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 RFC5P40937 340 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 ADARP55265 1226 aaKnown RBP12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 NAB1Q13506 487 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 SIX6OS1Q8N1H7 587 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 PRPF18Q99633 342 aaKnown RBP12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 TBC1D10AQ9BXI6 508 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 HEMGNQ9BXL5 484 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 WDR70Q9NW82 654 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 SLC12A6Q9UHW9 1150 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 DISP2A7MBM2 1401 aa12.21□□□□□ -0.45
DNMT3A-201ENST00000264709 CYP2D7A0A087X1C5 515 aa12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 LRRIQ4A6NIV6 560 aa12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 MRPS15P82914 257 aaKnown RBP12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 PPIDQ08752 370 aaKnown RBP12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 STILQ15468 1287 aa12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 PALB2Q86YC2 1186 aa12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 CEP19Q96LK0 163 aa12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 EFCAB1Q9HAE3 211 aa12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 PTTG2Q9NZH5 202 aa12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 F8W031 263 aaPredicted RBP12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 SNX17Q15036 470 aa12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 KRT27Q7Z3Y8 459 aa12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 ZNF555Q8NEP9 628 aa12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 GGT7Q9UJ14 662 aa12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 TCEA3O75764 348 aa12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 ZCCHC18P0CG32 403 aa12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 ALDH1B1P30837 517 aa12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 CDK16Q00536 496 aa12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 ZBTB18Q99592 522 aa12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 NRBP2Q9NSY0 501 aa12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 SYBUQ9NX95 663 aa12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 CHMP2BQ9UQN3 213 aa12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 NAALADL1Q9UQQ1 740 aa12.21□□□□□ -0.46
DNMT3A-201ENST00000264709 UMODL1Q5DID0 1318 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 SEC23AQ15436 765 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 KYAT1Q16773 422 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 RASGEF1CQ8N431 466 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 KIAA0895Q8NCT3 520 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 LXNQ9BS40 222 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 BEGAINQ9BUH8 593 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 C1orf50Q9BV19 199 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 CDYLQ9Y232 598 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 PSAPP07602 524 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 TPP2P29144 1249 aaPredicted RBP12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 SDC4P31431 198 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 PRKAA2P54646 552 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 ARHGEF16Q5VV41 709 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 HSD3B7Q9H2F3 369 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 GMEB1Q9Y692 573 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 ARHGEF37A1IGU5 675 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 USP17L5A8MUK1 530 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 DYNLL1P63167 89 aaKnown RBP12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 PPP2R5DQ14738 602 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 HP1BP3Q5SSJ5 553 aaPredicted RBP12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 TTC27Q6P3X3 843 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 BNC2Q6ZN30 1099 aaPredicted RBP12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 ZNF571Q7Z3V5 609 aaPredicted RBP12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 CCDC126Q96EE4 140 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 NDNQ99608 321 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 LRRC19Q9H756 370 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 TFCP2L1Q9NZI6 479 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 GJB6O95452 261 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 TRIM49P0CI25 452 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 TRIM49CP0CI26 452 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 PPARGP37231 505 aaPredicted RBP12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 TUBA4AP68366 448 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 CYTH1Q15438 398 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 Q4G0T1 1027 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 THNSL1Q8IYQ7 743 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 TBC1D16Q8TBP0 767 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 JAG2Q9Y219 1238 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 AK5Q9Y6K8 562 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 LRRC37A3O60309 1634 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 ARFGEF2Q9Y6D5 1785 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 RAP1GDS1P52306 607 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 CACNB1Q02641 598 aaPredicted RBP12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 SCARF1Q14162 830 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 TTC8Q8TAM2 541 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 PARD3BQ8TEW8 1205 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 FAM167AQ96KS9 214 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 SMYD2Q9NRG4 433 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 S100A1P23297 94 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 SPRP35270 261 aaPredicted RBP12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 CMPK2Q5EBM0 449 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 MAEAQ7L5Y9 396 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 NSUN4Q96CB9 384 aaKnown RBP12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 LRRC39Q96DD0 335 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 SEMA6BQ9H3T3 888 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 MYRFQ9Y2G1 1151 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 AFG3L2Q9Y4W6 797 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 GSTA4O15217 222 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 KLHL41O60662 606 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 VIL1P09327 827 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms