RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 UCMAQ8WVF2 138 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 PALMDQ9NP74 551 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 KRT82Q9NSB4 513 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 ZNF229Q9UJW7 825 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 UBE4BO95155 1302 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 MGEA5O60502 916 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 KRT3P12035 628 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 CYP11B1P15538 503 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 PSMD7P51665 324 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 KCNA1Q09470 495 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 DCTN2Q13561 401 aaKnown RBP15.79■□□□□ 0.12
CASC3-201ENST00000264645 TRIM67Q6ZTA4 783 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 ENOSF1Q7L5Y1 443 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 PPIL6Q8IXY8 311 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 KLHL23Q8NBE8 558 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 LNX1Q8TBB1 728 aaPredicted RBP15.79■□□□□ 0.12
CASC3-201ENST00000264645 DDI1Q8WTU0 396 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 CNKSR1Q969H4 720 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 ADPGKQ9BRR6 497 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 DDX56Q9NY93 547 aaKnown RBP15.79■□□□□ 0.12
CASC3-201ENST00000264645 ATXN10Q9UBB4 475 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 PCYOX1Q9UHG3 505 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 SLC24A2Q9UI40 661 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 PCDHB2Q9Y5E7 798 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 COMMD3-BMI1R4GMX3 469 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 F5H6K3 240 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 ZBTB39O15060 712 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 AKAP10O43572 662 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 TPBGLP0DKB5 382 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 TAC1P20366 129 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 OSBPP22059 807 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 RGS2P41220 211 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 KLRC3Q07444 240 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 SPRED3Q2MJR0 410 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 KHDC1Q4VXA5 237 aaKnown RBP15.79■□□□□ 0.12
CASC3-201ENST00000264645 FAXCQ5TGI0 409 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 TRIM72Q6ZMU5 477 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 SLC7A3Q8WY07 619 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 DCLK3Q9C098 648 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 ACP6Q9NPH0 428 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 SOX13Q9UN79 622 aa15.79■□□□□ 0.12
CASC3-201ENST00000264645 PPLO60437 1756 aa15.78■□□□□ 0.12
CASC3-201ENST00000264645 KCNN4O15554 427 aa15.78■□□□□ 0.12
CASC3-201ENST00000264645 WFS1O76024 890 aa15.78■□□□□ 0.12
CASC3-201ENST00000264645 NPTXRO95502 500 aa15.78■□□□□ 0.12
CASC3-201ENST00000264645 CASP5P51878 434 aa15.78■□□□□ 0.12
CASC3-201ENST00000264645 CDK16Q00536 496 aa15.78■□□□□ 0.12
CASC3-201ENST00000264645 CCNG2Q16589 344 aa15.78■□□□□ 0.12
CASC3-201ENST00000264645 CYP26B1Q9NR63 512 aa15.78■□□□□ 0.12
CASC3-201ENST00000264645 ARHGEF3Q9NR81 526 aa15.78■□□□□ 0.12
CASC3-201ENST00000264645 SRP68Q9UHB9 627 aaKnown RBP15.78■□□□□ 0.12
CASC3-201ENST00000264645 NUB1Q9Y5A7 615 aa15.78■□□□□ 0.12
CASC3-201ENST00000264645 RBAK-RBAKDNI3L0D1 243 aa15.78■□□□□ 0.12
CASC3-201ENST00000264645 HDAC4P56524 1084 aa15.78■□□□□ 0.12
CASC3-201ENST00000264645 RPS6P62753 249 aaKnown RBP15.78■□□□□ 0.12
CASC3-201ENST00000264645 IFRD2Q12894 506 aaPredicted RBP15.78■□□□□ 0.12
CASC3-201ENST00000264645 KIF19Q2TAC6 998 aa15.78■□□□□ 0.12
CASC3-201ENST00000264645 PRUNE1Q86TP1 453 aa15.78■□□□□ 0.12
CASC3-201ENST00000264645 SPATA18Q8TC71 538 aa15.78■□□□□ 0.12
CASC3-201ENST00000264645 ELMO3Q96BJ8 720 aa15.78■□□□□ 0.12
CASC3-201ENST00000264645 PAIP1Q9H074 479 aaKnown RBP15.78■□□□□ 0.12
CASC3-201ENST00000264645 SPC25Q9HBM1 224 aa15.78■□□□□ 0.12
CASC3-201ENST00000264645 PCDHA3Q9Y5H8 950 aa15.78■□□□□ 0.12
CASC3-201ENST00000264645 GTPBP10A4D1E9 387 aaKnown RBP15.78■□□□□ 0.12
CASC3-201ENST00000264645 PSMC3P17980 439 aa15.78■□□□□ 0.12
CASC3-201ENST00000264645 ZNF572Q7Z3I7 529 aaPredicted RBP15.78■□□□□ 0.12
CASC3-201ENST00000264645 C7orf31Q8N865 590 aa15.78■□□□□ 0.12
CASC3-201ENST00000264645 IL17RBQ9NRM6 502 aa15.78■□□□□ 0.12
CASC3-201ENST00000264645 EIF3DO15371 548 aaKnown RBP eCLIP15.77■□□□□ 0.12
CASC3-201ENST00000264645 SRGAP2CP0DJJ0 459 aa15.77■□□□□ 0.12
CASC3-201ENST00000264645 SRGAP2BP0DMP2 458 aa15.77■□□□□ 0.12
CASC3-201ENST00000264645 GYS1P13807 737 aa15.77■□□□□ 0.12
CASC3-201ENST00000264645 ARL4AP40617 200 aa15.77■□□□□ 0.12
CASC3-201ENST00000264645 OTUD4Q01804 1114 aaKnown RBP15.77■□□□□ 0.12
CASC3-201ENST00000264645 FUT2Q10981 343 aa15.77■□□□□ 0.12
CASC3-201ENST00000264645 SLC12A1Q13621 1099 aa15.77■□□□□ 0.12
CASC3-201ENST00000264645 LBRQ14739 615 aaKnown RBP15.77■□□□□ 0.12
CASC3-201ENST00000264645 PDK4Q16654 411 aa15.77■□□□□ 0.12
CASC3-201ENST00000264645 TNFRSF25Q93038 417 aa15.77■□□□□ 0.12
CASC3-201ENST00000264645 CSRNP1Q96S65 589 aa15.77■□□□□ 0.12
CASC3-201ENST00000264645 ZHX2Q9Y6X8 837 aa15.77■□□□□ 0.12
CASC3-201ENST00000264645 PXDNQ92626 1479 aa15.77■□□□□ 0.12
CASC3-201ENST00000264645 AGLP35573 1532 aa15.77■□□□□ 0.12
CASC3-201ENST00000264645 TCP10L2B9ZVM9 353 aa15.77■□□□□ 0.12
CASC3-201ENST00000264645 MED7O43513 233 aa15.77■□□□□ 0.12
CASC3-201ENST00000264645 TPST1O60507 370 aa15.77■□□□□ 0.12
CASC3-201ENST00000264645 ZSCAN5DPP0CG00 497 aa15.77■□□□□ 0.12
CASC3-201ENST00000264645 CHRM1P11229 460 aaPredicted RBP15.77■□□□□ 0.12
CASC3-201ENST00000264645 QARSP47897 775 aaKnown RBP15.77■□□□□ 0.12
CASC3-201ENST00000264645 EFTUD2Q15029 972 aaKnown RBP eCLIP15.77■□□□□ 0.127e-7■■■■■ 42.4
CASC3-201ENST00000264645 NKX1-1Q15270 411 aaPredicted RBP15.77■□□□□ 0.12
CASC3-201ENST00000264645 LPCAT2Q7L5N7 544 aa15.77■□□□□ 0.12
CASC3-201ENST00000264645 OTOAQ7RTW8 1153 aa15.77■□□□□ 0.12
CASC3-201ENST00000264645 ZBTB8OSQ8IWT0 167 aa15.77■□□□□ 0.12
CASC3-201ENST00000264645 ZNF786Q8N393 782 aa15.77■□□□□ 0.12
CASC3-201ENST00000264645 DHX38Q92620 1227 aaKnown RBP15.77■□□□□ 0.12
CASC3-201ENST00000264645 ZNF317Q96PQ6 595 aaPredicted RBP15.77■□□□□ 0.12
CASC3-201ENST00000264645 CBWD1Q9BRT8 395 aa15.77■□□□□ 0.12
CASC3-201ENST00000264645 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.77■□□□□ 0.12
CASC3-201ENST00000264645 NOL4O94818 638 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms