RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 GNAT1P11488 350 aa10.08□□□□□ -0.8
SIM1-201ENST00000262901 MSH2P43246 934 aa10.08□□□□□ -0.8
SIM1-201ENST00000262901 IFRD2Q12894 506 aaPredicted RBP10.08□□□□□ -0.8
SIM1-201ENST00000262901 TBX2Q13207 712 aaPredicted RBP10.08□□□□□ -0.8
SIM1-201ENST00000262901 EPC2Q52LR7 807 aa10.08□□□□□ -0.8
SIM1-201ENST00000262901 RNF169Q8NCN4 708 aa10.08□□□□□ -0.8
SIM1-201ENST00000262901 SLC17A8Q8NDX2 589 aa10.08□□□□□ -0.8
SIM1-201ENST00000262901 MCPH1Q8NEM0 835 aa10.08□□□□□ -0.8
SIM1-201ENST00000262901 PTPN18Q99952 460 aa10.08□□□□□ -0.8
SIM1-201ENST00000262901 KLHL11Q9NVR0 708 aa10.08□□□□□ -0.8
SIM1-201ENST00000262901 TUBGCP4Q9UGJ1 667 aa10.08□□□□□ -0.8
SIM1-201ENST00000262901 LNPEPQ9UIQ6 1025 aa10.08□□□□□ -0.8
SIM1-201ENST00000262901 TIMM22Q9Y584 194 aa10.08□□□□□ -0.8
SIM1-201ENST00000262901 GRID2IPA4D2P6 1211 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 H0YCG3 227 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 SUPT20HL2P0C7V6 817 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 FNTAP49354 379 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 CASP4P49662 377 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 KCNA1Q09470 495 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 TMEM119Q4V9L6 283 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 ATP2A3Q93084 1043 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 LENG9Q96B70 501 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 PNMA5Q96PV4 448 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 MSTO1Q9BUK6 570 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 SMARCAD1Q9H4L7 1026 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 ANKEF1Q9NU02 776 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 KCND2Q9NZV8 630 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 ZNF646O15015 1829 aaPredicted RBP10.07□□□□□ -0.8
SIM1-201ENST00000262901 TMEM221A6NGB7 291 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 TRIM64CA6NLI5 447 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 PI4K2BG5E9Z4 385 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 NKRFO15226 690 aaKnown RBP eCLIP10.07□□□□□ -0.8
SIM1-201ENST00000262901 MEFVO15553 781 aaPredicted RBP10.07□□□□□ -0.8
SIM1-201ENST00000262901 FMO5P49326 533 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 PDE1BQ01064 536 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 TNFAIP2Q03169 654 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 LMNB2Q03252 620 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 SLC15A3Q8IY34 581 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 MAB21L3Q8N8X9 362 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 SYT2Q8N9I0 419 aaPredicted RBP10.07□□□□□ -0.8
SIM1-201ENST00000262901 ANKK1Q8NFD2 765 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 PYROXD1Q8WU10 500 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 C9orf72Q96LT7 481 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 RMDN2Q96LZ7 410 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 APBA2Q99767 749 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 NGRNQ9NPE2 291 aaKnown RBP10.07□□□□□ -0.8
SIM1-201ENST00000262901 PCSK1NQ9UHG2 260 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 DCTN4Q9UJW0 460 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 DBR1Q9UK59 544 aaKnown RBP10.07□□□□□ -0.8
SIM1-201ENST00000262901 VAV3Q9UKW4 847 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 A0A0G2JND7 137 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 DYNC1LI2O43237 492 aaPredicted RBP10.07□□□□□ -0.8
SIM1-201ENST00000262901 ATP9AO75110 1047 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 MT-ND3P03897 115 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 UBA1P22314 1058 aaKnown RBP10.07□□□□□ -0.8
SIM1-201ENST00000262901 ICAM3P32942 547 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 YWHAEP62258 255 aaKnown RBP10.07□□□□□ -0.8
SIM1-201ENST00000262901 PRKCEQ02156 737 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 ITGB3BPQ13352 177 aaPredicted RBP10.07□□□□□ -0.8
SIM1-201ENST00000262901 ACVR2BQ13705 512 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 PDCD7Q8N8D1 485 aaKnown RBP10.07□□□□□ -0.8
SIM1-201ENST00000262901 MDM1Q8TC05 714 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 ZNF473Q8WTR7 871 aaKnown RBP10.07□□□□□ -0.8
SIM1-201ENST00000262901 TTC17Q96AE7 1141 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 CHMP6Q96FZ7 201 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 CFAP57Q96MR6 1250 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 PLS3P13797 630 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 TCF7P36402 384 aaPredicted RBP10.07□□□□□ -0.8
SIM1-201ENST00000262901 MOGSQ13724 837 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 LY6KQ17RY6 165 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 DARS2Q6PI48 645 aaKnown RBP10.07□□□□□ -0.8
SIM1-201ENST00000262901 C4orf19Q8IY42 314 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 CRYGNQ8WXF5 182 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 AGPAT1Q99943 283 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 TIPINQ9BVW5 301 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 SLITRK6Q9H5Y7 841 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 ATP6V0A4Q9HBG4 840 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 SEL1LQ9UBV2 794 aa10.07□□□□□ -0.8
SIM1-201ENST00000262901 CAPN9O14815 690 aa10.06□□□□□ -0.8
SIM1-201ENST00000262901 CLDN3O15551 220 aa10.06□□□□□ -0.8
SIM1-201ENST00000262901 SPAG7O75391 227 aa10.06□□□□□ -0.8
SIM1-201ENST00000262901 SLITRK3O94933 977 aa10.06□□□□□ -0.8
SIM1-201ENST00000262901 P4HA1P13674 534 aa10.06□□□□□ -0.8
SIM1-201ENST00000262901 MDM2Q00987 491 aaPredicted RBP10.06□□□□□ -0.8
SIM1-201ENST00000262901 ROR2Q01974 943 aaKnown RBP10.06□□□□□ -0.8
SIM1-201ENST00000262901 RCN1Q15293 331 aa10.06□□□□□ -0.8
SIM1-201ENST00000262901 NAB2Q15742 525 aa10.06□□□□□ -0.8
SIM1-201ENST00000262901 SYCP2LQ5T4T6 812 aa10.06□□□□□ -0.8
SIM1-201ENST00000262901 NXNQ6DKJ4 435 aa10.06□□□□□ -0.8
SIM1-201ENST00000262901 OR6B2Q6IFH4 312 aa10.06□□□□□ -0.8
SIM1-201ENST00000262901 TRIM50Q86XT4 487 aa10.06□□□□□ -0.8
SIM1-201ENST00000262901 USP38Q8NB14 1042 aa10.06□□□□□ -0.8
SIM1-201ENST00000262901 KIAA0895Q8NCT3 520 aa10.06□□□□□ -0.8
SIM1-201ENST00000262901 OCEL1Q9H607 264 aa10.06□□□□□ -0.8
SIM1-201ENST00000262901 NAGPAQ9UK23 515 aa10.06□□□□□ -0.8
SIM1-201ENST00000262901 TM4SF4P48230 202 aa10.06□□□□□ -0.8
SIM1-201ENST00000262901 MYO1EQ12965 1108 aa10.06□□□□□ -0.8
SIM1-201ENST00000262901 C2CD6Q53TS8 623 aa10.06□□□□□ -0.8
SIM1-201ENST00000262901 PPP6R3Q5H9R7 873 aaPredicted RBP10.06□□□□□ -0.8
SIM1-201ENST00000262901 IQSEC1Q6DN90 963 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms