RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 ATP2A3Q93084 1043 aa8.68□□□□□ -1.02
PTPN3-201ENST00000262539 NAT9Q9BTE0 207 aa8.68□□□□□ -1.02
PTPN3-201ENST00000262539 PDE11AQ9HCR9 933 aa8.68□□□□□ -1.02
PTPN3-201ENST00000262539 ARL4AP40617 200 aa8.68□□□□□ -1.02
PTPN3-201ENST00000262539 CASP5P51878 434 aa8.68□□□□□ -1.02
PTPN3-201ENST00000262539 ACVR2BQ13705 512 aa8.68□□□□□ -1.02
PTPN3-201ENST00000262539 CEP120Q8N960 986 aa8.68□□□□□ -1.02
PTPN3-201ENST00000262539 PCDHGC3Q9UN70 934 aa8.68□□□□□ -1.02
PTPN3-201ENST00000262539 SOWAHBA6NEL2 793 aa8.68□□□□□ -1.02
PTPN3-201ENST00000262539 GPR182O15218 404 aa8.68□□□□□ -1.02
PTPN3-201ENST00000262539 BUB1BO60566 1050 aaPredicted RBP8.68□□□□□ -1.02
PTPN3-201ENST00000262539 MX2P20592 715 aa8.68□□□□□ -1.02
PTPN3-201ENST00000262539 CLDN10P78369 228 aa8.68□□□□□ -1.02
PTPN3-201ENST00000262539 PPP3CAQ08209 521 aa8.68□□□□□ -1.02
PTPN3-201ENST00000262539 BYSLQ13895 437 aaKnown RBP8.68□□□□□ -1.02
PTPN3-201ENST00000262539 PDK2Q15119 407 aa8.68□□□□□ -1.02
PTPN3-201ENST00000262539 C6orf118Q5T5N4 469 aa8.68□□□□□ -1.02
PTPN3-201ENST00000262539 DENND2CQ68D51 928 aa8.68□□□□□ -1.02
PTPN3-201ENST00000262539 CEP57Q86XR8 500 aa8.68□□□□□ -1.02
PTPN3-201ENST00000262539 PDIK1LQ8N165 341 aa8.68□□□□□ -1.02
PTPN3-201ENST00000262539 HES6Q96HZ4 224 aa8.68□□□□□ -1.02
PTPN3-201ENST00000262539 MTG1Q9BT17 334 aaPredicted RBP8.68□□□□□ -1.02
PTPN3-201ENST00000262539 CNTN6Q9UQ52 1028 aa8.68□□□□□ -1.02
PTPN3-201ENST00000262539 CASQ2O14958 399 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-201ENST00000262539 FTCDO95954 541 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 AARSP49588 968 aaKnown RBP eCLIP8.67□□□□□ -1.02
PTPN3-201ENST00000262539 ZNF157P51786 506 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-201ENST00000262539 AIF1P55008 147 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 CCDC62Q6P9F0 684 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 GPATCH11Q8N954 259 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 C11orf70Q9BRQ4 267 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 NUP85Q9BW27 656 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 REXO2Q9Y3B8 237 aaKnown RBP8.67□□□□□ -1.02
PTPN3-201ENST00000262539 RIPK3Q9Y572 518 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 CAPN6Q9Y6Q1 641 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 DYNC1LI2O43237 492 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-201ENST00000262539 NOL4O94818 638 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 HIRAP54198 1017 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-201ENST00000262539 CCNG2Q16589 344 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 ARL13BQ3SXY8 428 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 CDKL3Q8IVW4 592 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-201ENST00000262539 RASGEF1CQ8N431 466 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 FEZF2Q8TBJ5 459 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 KRT12Q99456 494 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 BTBD7Q9P203 1132 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 CYP26A1O43174 497 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 DUSP11O75319 330 aaKnown RBP8.67□□□□□ -1.02
PTPN3-201ENST00000262539 NPTXRO95502 500 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 RARBP10826 455 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 MARK3P27448 753 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 CTNNA1P35221 906 aaKnown RBP8.67□□□□□ -1.02
PTPN3-201ENST00000262539 IL1RL1Q01638 556 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 GOLGA8FQ08AF8 430 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 GOLGA8DPQ0D2H9 430 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 BEND6Q5SZJ8 279 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-201ENST00000262539 TRIM42Q8IWZ5 723 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 CTAGE3PQ8IX95 158 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 KLHL7Q8IXQ5 586 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 KRT35Q92764 455 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 MID2Q9UJV3 735 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 ENC1O14682 589 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 EDIL3O43854 480 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 PRPSAP2O60256 369 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 GLI1P08151 1106 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 PCK1P35558 622 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 EPHB1P54762 984 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 KRT71Q3SY84 523 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 KIAA1755Q5JYT7 1200 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 TAB3Q8N5C8 712 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-201ENST00000262539 ARRDC4Q8NCT1 418 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 SLC35G2Q8TBE7 412 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 RAET1EQ8TD07 263 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 ERP44Q9BS26 406 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 PTCH2Q9Y6C5 1203 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 C17orf102A2RUQ5 167 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 MCF2LO15068 1137 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 GRB14Q14449 540 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 NFE2Q16621 373 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-201ENST00000262539 OLFML2BQ68BL8 750 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 JADE1Q6IE81 842 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 MCOLN2Q8IZK6 566 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 NLGN2Q8NFZ4 835 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 GLT1D1Q96MS3 346 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 ACO2Q99798 780 aaKnown RBP8.67□□□□□ -1.02
PTPN3-201ENST00000262539 LRRC4Q9HBW1 653 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 SIX2Q9NPC8 291 aa8.67□□□□□ -1.02
PTPN3-201ENST00000262539 SERPINB6P35237 376 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 SLC12A1Q13621 1099 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 DSTYKQ6XUX3 929 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 ASAP3Q8TDY4 903 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 RILPQ96NA2 401 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 OXCT2Q9BYC2 517 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-201ENST00000262539 NAV1Q8NEY1 1877 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 C22orf31O95567 290 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 AGBL2Q5U5Z8 902 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 DRICH1Q6PGQ1 229 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-201ENST00000262539 GPR142Q7Z601 462 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 RNF180Q86T96 592 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 NT5DC3Q86UY8 548 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 KATNAL2Q8IYT4 538 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms