RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 LIN9Q5TKA1 542 aa14.41□□□□□ -0.1
VMP1-201ENST00000262291 EMBQ6PCB8 327 aa14.41□□□□□ -0.1
VMP1-201ENST00000262291 OR2W6PQ8NHA6 318 aa14.41□□□□□ -0.1
VMP1-201ENST00000262291 CCDC26Q8TAB7 109 aa14.41□□□□□ -0.1
VMP1-201ENST00000262291 KIF12Q96FN5 646 aa14.41□□□□□ -0.1
VMP1-201ENST00000262291 GOLGA6L10A0A0M3HER8 536 aa14.41□□□□□ -0.1
VMP1-201ENST00000262291 KRT14P02533 472 aa14.41□□□□□ -0.1
VMP1-201ENST00000262291 MCF2P10911 925 aa14.41□□□□□ -0.1
VMP1-201ENST00000262291 CYP2C9P11712 490 aa14.41□□□□□ -0.1
VMP1-201ENST00000262291 CTGFP29279 349 aa14.41□□□□□ -0.1
VMP1-201ENST00000262291 TMEM132DQ14C87 1099 aa14.41□□□□□ -0.1
VMP1-201ENST00000262291 SURF1Q15526 300 aa14.41□□□□□ -0.1
VMP1-201ENST00000262291 CATSPER4Q7RTX7 472 aa14.41□□□□□ -0.1
VMP1-201ENST00000262291 ANKS1BQ7Z6G8 1248 aa14.41□□□□□ -0.1
VMP1-201ENST00000262291 SLC13A5Q86YT5 568 aaPredicted RBP14.41□□□□□ -0.1
VMP1-201ENST00000262291 CCDC50Q8IVM0 306 aa14.41□□□□□ -0.1
VMP1-201ENST00000262291 MCEEQ96PE7 176 aa14.41□□□□□ -0.1
VMP1-201ENST00000262291 ACBD3Q9H3P7 528 aa14.41□□□□□ -0.1
VMP1-201ENST00000262291 KLK14Q9P0G3 267 aa14.41□□□□□ -0.1
VMP1-201ENST00000262291 CYTH4Q9UIA0 394 aa14.41□□□□□ -0.1
VMP1-201ENST00000262291 TTC7AQ9ULT0 858 aaPredicted RBP14.41□□□□□ -0.1
VMP1-201ENST00000262291 GNEQ9Y223 722 aaKnown RBP14.41□□□□□ -0.1
VMP1-201ENST00000262291 TRIP11Q15643 1979 aa14.41□□□□□ -0.1
VMP1-201ENST00000262291 TREHO43280 583 aa14.4□□□□□ -0.1
VMP1-201ENST00000262291 ZNF865P0CJ78 1059 aaPredicted RBP14.4□□□□□ -0.1
VMP1-201ENST00000262291 AKAP5P24588 427 aa14.4□□□□□ -0.1
VMP1-201ENST00000262291 KCTD16Q68DU8 428 aa14.4□□□□□ -0.1
VMP1-201ENST00000262291 ARL8AQ96BM9 186 aa14.4□□□□□ -0.1
VMP1-201ENST00000262291 ACAP3Q96P50 834 aa14.4□□□□□ -0.1
VMP1-201ENST00000262291 ARHGAP39Q9C0H5 1083 aa14.4□□□□□ -0.1
VMP1-201ENST00000262291 VIPAS39Q9H9C1 493 aa14.4□□□□□ -0.1
VMP1-201ENST00000262291 IL18RAPO95256 599 aa14.4□□□□□ -0.1
VMP1-201ENST00000262291 TNFRSF8P28908 595 aa14.4□□□□□ -0.1
VMP1-201ENST00000262291 OGDHQ02218 1023 aa14.4□□□□□ -0.1
VMP1-201ENST00000262291 MFSD10Q14728 455 aa14.4□□□□□ -0.1
VMP1-201ENST00000262291 MAATS1Q7Z4T9 603 aa14.4□□□□□ -0.1
VMP1-201ENST00000262291 TMEM40Q8WWA1 233 aa14.4□□□□□ -0.1
VMP1-201ENST00000262291 CAVIN3Q969G5 261 aa14.4□□□□□ -0.1
VMP1-201ENST00000262291 C18orf25Q96B23 403 aaPredicted RBP14.4□□□□□ -0.1
VMP1-201ENST00000262291 RNF25Q96BH1 459 aaPredicted RBP14.4□□□□□ -0.1
VMP1-201ENST00000262291 HPDLQ96IR7 371 aa14.4□□□□□ -0.1
VMP1-201ENST00000262291 NFKBIZQ9BYH8 718 aa14.4□□□□□ -0.1
VMP1-201ENST00000262291 ELOVL4Q9GZR5 314 aa14.4□□□□□ -0.1
VMP1-201ENST00000262291 SLITRK6Q9H5Y7 841 aa14.4□□□□□ -0.1
VMP1-201ENST00000262291 UTP11Q9Y3A2 253 aaKnown RBP14.4□□□□□ -0.1
VMP1-201ENST00000262291 MYADML2A6NDP7 307 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 HOXA11P31270 313 aaPredicted RBP14.39□□□□□ -0.11
VMP1-201ENST00000262291 TRIP13Q15645 432 aaPredicted RBP14.39□□□□□ -0.11
VMP1-201ENST00000262291 FAM187BQ17R55 369 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 PHF13Q86YI8 300 aaPredicted RBP14.39□□□□□ -0.11
VMP1-201ENST00000262291 JAMLQ86YT9 394 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 UBA3Q8TBC4 463 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 ZMAT2Q96NC0 199 aaKnown RBP14.39□□□□□ -0.11
VMP1-201ENST00000262291 LPIN3Q9BQK8 851 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 ADAMTS10Q9H324 1103 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 NXF3Q9H4D5 531 aaKnown RBP14.39□□□□□ -0.11
VMP1-201ENST00000262291 MED4Q9NPJ6 270 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 AVENQ9NQS1 362 aaPredicted RBP14.39□□□□□ -0.11
VMP1-201ENST00000262291 F8VP50 259 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 HSF2BPO75031 334 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 MMP8P22894 467 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 CTNNA2P26232 953 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 AARSP49588 968 aaKnown RBP eCLIP14.39□□□□□ -0.11
VMP1-201ENST00000262291 RAD23BP54727 409 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 TXNRD3NBQ6F5E7 133 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 CCDC137Q6PK04 289 aaKnown RBP14.39□□□□□ -0.11
VMP1-201ENST00000262291 CCDC105Q8IYK2 499 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 SH2D3CQ8N5H7 860 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 CXorf38Q8TB03 319 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 PIK3R5Q8WYR1 880 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 NAP1L3Q99457 506 aaPredicted RBP14.39□□□□□ -0.11
VMP1-201ENST00000262291 CENPHQ9H3R5 247 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 CD248Q9HCU0 757 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 CHST7Q9NS84 486 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 DPP3Q9NY33 737 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 SLC5A4Q9NY91 659 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 R3HDM2Q9Y2K5 976 aaKnown RBP14.39□□□□□ -0.11
VMP1-201ENST00000262291 COL1A2P08123 1366 aa14.39□□□□□ -0.11
VMP1-201ENST00000262291 A0A1B0GUA9 196 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 A6NJR5 290 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 HCRTO43612 131 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 PHF2O75151 1096 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 GPR32O75388 356 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 PROSCO94903 275 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 PSMC4P43686 418 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 PLTPP55058 493 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 CRHR2Q13324 411 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 SIX1Q15475 284 aaPredicted RBP14.38□□□□□ -0.11
VMP1-201ENST00000262291 CFAP58Q5T655 872 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 KAZNQ674X7 775 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 TRIM72Q6ZMU5 477 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 PRUNE1Q86TP1 453 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 SAPCD2Q86UD0 394 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 ERICH1Q86X53 443 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 IFNL1Q8IU54 200 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 WHAMMQ8TF30 809 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 ADPGKQ9BRR6 497 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 TUBGCP4Q9UGJ1 667 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 EBAG9O00559 213 aa14.38□□□□□ -0.11
VMP1-201ENST00000262291 TNPO2O14787 897 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms