RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 RTP2Q5QGT7 225 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 PLA2G4FQ68DD2 849 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 TMC6Q7Z403 805 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 EXOC8Q8IYI6 725 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 SLC7A14Q8TBB6 771 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 CEP170P1Q96L14 293 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 ZFP42Q96MM3 310 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 CCDC43Q96MW1 224 aaKnown RBP14.41□□□□□ -0.1
SGCA-201ENST00000262018 CEP89Q96ST8 783 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 RNF39Q9H2S5 420 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 KCNF1Q9H3M0 494 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 IFT122Q9HBG6 1241 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 ARID2Q68CP9 1835 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 ARHGEF35A5YM69 484 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 KCNJ18B7U540 433 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 TADA2AO75478 443 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 KIF20AO95235 890 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 EEF1GP26641 437 aaKnown RBP14.41□□□□□ -0.1
SGCA-201ENST00000262018 RFC5P40937 340 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 CACNB1Q02641 598 aaPredicted RBP14.41□□□□□ -0.1
SGCA-201ENST00000262018 LRRC63Q05C16 580 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 GAS6Q14393 721 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 KCNJ12Q14500 433 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 KRT31Q15323 416 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 FILIP1LQ4L180 1135 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 XKR9Q5GH70 373 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 SPEM1Q8N4L4 309 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 CSGALNACT2Q8N6G5 542 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 GLIS3Q8NEA6 775 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 ANKRD20A12PQ8NF67 263 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 ELSPBP1Q96BH3 223 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 ZNF830Q96NB3 372 aaPredicted RBP14.41□□□□□ -0.1
SGCA-201ENST00000262018 CLSTN3Q9BQT9 956 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 JPH2Q9BR39 696 aaPredicted RBP14.41□□□□□ -0.1
SGCA-201ENST00000262018 APOL6Q9BWW8 343 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 SRRTQ9BXP5 876 aaKnown RBP14.41□□□□□ -0.1
SGCA-201ENST00000262018 TMEM121BQ9BXQ6 578 aaPredicted RBP14.41□□□□□ -0.1
SGCA-201ENST00000262018 ADAM33Q9BZ11 813 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 RTN4Q9NQC3 1192 aaKnown RBP14.41□□□□□ -0.1
SGCA-201ENST00000262018 GDE1Q9NZC3 331 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 IPPQ9Y573 584 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 COL4A3BPQ9Y5P4 624 aa14.41□□□□□ -0.1
SGCA-201ENST00000262018 TBCAO75347 108 aaKnown RBP14.4□□□□□ -0.1
SGCA-201ENST00000262018 CHRNB1P11230 501 aa14.4□□□□□ -0.1
SGCA-201ENST00000262018 GUCY2CP25092 1073 aa14.4□□□□□ -0.1
SGCA-201ENST00000262018 RARRES1P49788 294 aa14.4□□□□□ -0.1
SGCA-201ENST00000262018 NOVA1P51513 510 aaKnown RBP14.4□□□□□ -0.1
SGCA-201ENST00000262018 ZNF131P52739 623 aa14.4□□□□□ -0.1
SGCA-201ENST00000262018 NPEPPSP55786 919 aa14.4□□□□□ -0.1
SGCA-201ENST00000262018 RAD51AP2Q09MP3 1159 aa14.4□□□□□ -0.1
SGCA-201ENST00000262018 ZCWPW2Q504Y3 356 aa14.4□□□□□ -0.1
SGCA-201ENST00000262018 EPM2AIP1Q7L775 607 aaPredicted RBP14.4□□□□□ -0.1
SGCA-201ENST00000262018 SFR1Q86XK3 245 aa14.4□□□□□ -0.1
SGCA-201ENST00000262018 CEP57Q86XR8 500 aa14.4□□□□□ -0.1
SGCA-201ENST00000262018 FAM114A1Q8IWE2 563 aa14.4□□□□□ -0.1
SGCA-201ENST00000262018 SLC7A3Q8WY07 619 aa14.4□□□□□ -0.1
SGCA-201ENST00000262018 EIF2AQ9BY44 585 aaKnown RBP14.4□□□□□ -0.1
SGCA-201ENST00000262018 FGFBP2Q9BYJ0 223 aa14.4□□□□□ -0.1
SGCA-201ENST00000262018 SMOC1Q9H4F8 434 aa14.4□□□□□ -0.1
SGCA-201ENST00000262018 MINDY3Q9H8M7 445 aa14.4□□□□□ -0.1
SGCA-201ENST00000262018 OLFML3Q9NRN5 406 aa14.4□□□□□ -0.1
SGCA-201ENST00000262018 ODF2LQ9ULJ1 636 aa14.4□□□□□ -0.1
SGCA-201ENST00000262018 HES2Q9Y543 173 aa14.4□□□□□ -0.1
SGCA-201ENST00000262018 PIAS3Q9Y6X2 628 aa14.4□□□□□ -0.1
SGCA-201ENST00000262018 MYH11P35749 1972 aa14.39□□□□□ -0.11
SGCA-201ENST00000262018 GREB1Q4ZG55 1949 aa14.39□□□□□ -0.11
SGCA-201ENST00000262018 ASPMQ8IZT6 3477 aa14.39□□□□□ -0.11
SGCA-201ENST00000262018 K7ESF4 209 aa14.39□□□□□ -0.11
SGCA-201ENST00000262018 GIPC1O14908 333 aa14.39□□□□□ -0.11
SGCA-201ENST00000262018 MAFO75444 373 aaPredicted RBP14.39□□□□□ -0.11
SGCA-201ENST00000262018 DGAT1O75907 488 aa14.39□□□□□ -0.11
SGCA-201ENST00000262018 FAM13AO94988 1023 aa14.39□□□□□ -0.11
SGCA-201ENST00000262018 FGFR1OPO95684 399 aaKnown RBP14.39□□□□□ -0.11
SGCA-201ENST00000262018 SRGAP2CP0DJJ0 459 aa14.39□□□□□ -0.11
SGCA-201ENST00000262018 PBX1P40424 430 aa14.39□□□□□ -0.11
SGCA-201ENST00000262018 COPB1P53618 953 aaKnown RBP14.39□□□□□ -0.11
SGCA-201ENST00000262018 ZNF252P-AS1Q0IIN9 211 aa14.39□□□□□ -0.11
SGCA-201ENST00000262018 PSMD5Q16401 504 aa14.39□□□□□ -0.11
SGCA-201ENST00000262018 POTEHQ6S545 545 aa14.39□□□□□ -0.11
SGCA-201ENST00000262018 SRGAP1Q7Z6B7 1085 aa14.39□□□□□ -0.11
SGCA-201ENST00000262018 FILIP1Q7Z7B0 1213 aa14.39□□□□□ -0.11
SGCA-201ENST00000262018 CACTINQ8WUQ7 758 aaKnown RBP14.39□□□□□ -0.11
SGCA-201ENST00000262018 SCFD1Q8WVM8 642 aa14.39□□□□□ -0.11
SGCA-201ENST00000262018 ZCCHC14Q8WYQ9 949 aaKnown RBP14.39□□□□□ -0.11
SGCA-201ENST00000262018 TSG101Q99816 390 aa14.39□□□□□ -0.11
SGCA-201ENST00000262018 TTPALQ9BTX7 342 aa14.39□□□□□ -0.11
SGCA-201ENST00000262018 TRMT61BQ9BVS5 477 aaKnown RBP14.39□□□□□ -0.11
SGCA-201ENST00000262018 DHX33Q9H6R0 707 aaKnown RBP14.39□□□□□ -0.11
SGCA-201ENST00000262018 RRAGDQ9NQL2 400 aaPredicted RBP14.39□□□□□ -0.11
SGCA-201ENST00000262018 TBC1D7Q9P0N9 293 aa14.39□□□□□ -0.11
SGCA-201ENST00000262018 MAGEC2Q9UBF1 373 aaPredicted RBP14.39□□□□□ -0.11
SGCA-201ENST00000262018 SEL1LQ9UBV2 794 aa14.39□□□□□ -0.11
SGCA-201ENST00000262018 NOTCH4Q99466 2003 aa14.38□□□□□ -0.11
SGCA-201ENST00000262018 ADAM12O43184 909 aa14.38□□□□□ -0.11
SGCA-201ENST00000262018 ZIC2O95409 532 aaPredicted RBP14.38□□□□□ -0.11
SGCA-201ENST00000262018 TOP3BO95985 862 aaKnown RBP14.38□□□□□ -0.11
SGCA-201ENST00000262018 RHOP08100 348 aa14.38□□□□□ -0.11
SGCA-201ENST00000262018 POU2F2P09086 479 aa14.38□□□□□ -0.11
SGCA-201ENST00000262018 CEBPBP17676 345 aa14.38□□□□□ -0.11
SGCA-201ENST00000262018 TERF1P54274 439 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms