RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 TKTP29401 623 aaKnown RBP12.44□□□□□ -0.42
PFDN1-201ENST00000261813 MTIF2P46199 727 aaKnown RBP12.44□□□□□ -0.42
PFDN1-201ENST00000261813 GLUD2P49448 558 aa12.44□□□□□ -0.42
PFDN1-201ENST00000261813 TAF6P49848 677 aa12.44□□□□□ -0.42
PFDN1-201ENST00000261813 UBASH3AP57075 661 aa12.44□□□□□ -0.42
PFDN1-201ENST00000261813 LILRA4P59901 499 aa12.44□□□□□ -0.42
PFDN1-201ENST00000261813 DSG1Q02413 1049 aa12.44□□□□□ -0.42
PFDN1-201ENST00000261813 ENPEPQ07075 957 aa12.44□□□□□ -0.42
PFDN1-201ENST00000261813 ELAVL2Q12926 359 aaKnown RBP12.44□□□□□ -0.42
PFDN1-201ENST00000261813 USP41Q3LFD5 358 aa12.44□□□□□ -0.42
PFDN1-201ENST00000261813 CCDC40Q4G0X9 1142 aa12.44□□□□□ -0.42
PFDN1-201ENST00000261813 TDRD10Q5VZ19 366 aaKnown RBP12.44□□□□□ -0.42
PFDN1-201ENST00000261813 PDE12Q6L8Q7 609 aaKnown RBP12.44□□□□□ -0.42
PFDN1-201ENST00000261813 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.44□□□□□ -0.42
PFDN1-201ENST00000261813 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.44□□□□□ -0.42
PFDN1-201ENST00000261813 CREBRFQ8IUR6 639 aa12.44□□□□□ -0.42
PFDN1-201ENST00000261813 MRPL43Q8N983 215 aaKnown RBP12.44□□□□□ -0.42
PFDN1-201ENST00000261813 MRFAP1L1Q96HT8 127 aa12.44□□□□□ -0.42
PFDN1-201ENST00000261813 SUSD3Q96L08 255 aa12.44□□□□□ -0.42
PFDN1-201ENST00000261813 HSD3B7Q9H2F3 369 aa12.44□□□□□ -0.42
PFDN1-201ENST00000261813 ARMCX3Q9UH62 379 aaPredicted RBP12.44□□□□□ -0.42
PFDN1-201ENST00000261813 PCDHB3Q9Y5E6 796 aa12.44□□□□□ -0.42
PFDN1-201ENST00000261813 IRAK3Q9Y616 596 aa12.44□□□□□ -0.42
PFDN1-201ENST00000261813 TRANK1O15050 2925 aa12.44□□□□□ -0.42
PFDN1-201ENST00000261813 GOLGA6L6A8MZA4 724 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 M0QZQ0 153 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 C2CD2LO14523 706 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 TRAPPC3O43617 180 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 CA8P35219 290 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 GTF2F1P35269 517 aaKnown RBP eCLIP12.43□□□□□ -0.42
PFDN1-201ENST00000261813 AP3M2P53677 418 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 RBP5P82980 135 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 PPP3CAQ08209 521 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 HYAL1Q12794 435 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 PRSS55Q6UWB4 352 aaPredicted RBP12.43□□□□□ -0.42
PFDN1-201ENST00000261813 C15orf39Q6ZRI6 1047 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 SV2AQ7L0J3 742 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 CEP57Q86XR8 500 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 LRRC52Q8N7C0 313 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 LNX1Q8TBB1 728 aaPredicted RBP12.43□□□□□ -0.42
PFDN1-201ENST00000261813 RIN2Q8WYP3 895 aaPredicted RBP12.43□□□□□ -0.42
PFDN1-201ENST00000261813 FAM122AQ96E09 287 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 CNOT6LQ96LI5 555 aaKnown RBP12.43□□□□□ -0.42
PFDN1-201ENST00000261813 ZNF560Q96MR9 790 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 TTPALQ9BTX7 342 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 MRPL17Q9NRX2 175 aaKnown RBP12.43□□□□□ -0.42
PFDN1-201ENST00000261813 VWA8A3KMH1 1905 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 MUC3AQ02505 3323 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 SYN3O14994 580 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 PER2O15055 1255 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 STX10O60499 249 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 VNN1O95497 513 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 ADCY5O95622 1261 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 ATP1A3P13637 1013 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 CD46P15529 392 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 CDC25BP30305 580 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 CLCN1P35523 988 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 PNPLA4P41247 253 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 GCGRP47871 477 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 GCLMP48507 274 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 NRIP1P48552 1158 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 CCDC173Q0VFZ6 552 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 BIRC3Q13489 604 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 SKIV2LQ15477 1246 aaKnown RBP12.43□□□□□ -0.42
PFDN1-201ENST00000261813 MAN2A1Q16706 1144 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 DUSP6Q16828 381 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 ZACNQ401N2 412 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 SV2CQ496J9 727 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 DCAF17Q5H9S7 520 aaPredicted RBP12.43□□□□□ -0.42
PFDN1-201ENST00000261813 FKBP15Q5T1M5 1219 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 KIAA1841Q6NSI8 718 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 DSTYKQ6XUX3 929 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 RBM23Q86U06 439 aaKnown RBP12.43□□□□□ -0.42
PFDN1-201ENST00000261813 IRF2BP1Q8IU81 584 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 PIK3R5Q8WYR1 880 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 SLC35C1Q96A29 364 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 SENP8Q96LD8 212 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 KLHL5Q96PQ7 755 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 TUBGCP2Q9BSJ2 902 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 C1QTNF1Q9BXJ1 281 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 MMRN2Q9H8L6 949 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 RXFP1Q9HBX9 757 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 IFNKQ9P0W0 207 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 SSX2IPQ9Y2D8 614 aa12.43□□□□□ -0.42
PFDN1-201ENST00000261813 TIMM13Q9Y5L4 95 aaPredicted RBP12.43□□□□□ -0.42
PFDN1-201ENST00000261813 SCN1AP35498 2009 aa12.42□□□□□ -0.42
PFDN1-201ENST00000261813 A0A1B0GTH6 734 aa12.42□□□□□ -0.42
PFDN1-201ENST00000261813 KPNA7A9QM74 516 aa12.42□□□□□ -0.42
PFDN1-201ENST00000261813 CNPP09543 421 aaKnown RBP12.42□□□□□ -0.42
PFDN1-201ENST00000261813 RPL17P18621 184 aaKnown RBP12.42□□□□□ -0.42
PFDN1-201ENST00000261813 PAX3P23760 479 aa12.42□□□□□ -0.42
PFDN1-201ENST00000261813 PLA2G5P39877 138 aa12.42□□□□□ -0.42
PFDN1-201ENST00000261813 ZNF75DP51815 510 aa12.42□□□□□ -0.42
PFDN1-201ENST00000261813 COPB1P53618 953 aaKnown RBP12.42□□□□□ -0.42
PFDN1-201ENST00000261813 MYL6P60660 151 aa12.42□□□□□ -0.42
PFDN1-201ENST00000261813 MRPL58Q14197 206 aaKnown RBP12.42□□□□□ -0.42
PFDN1-201ENST00000261813 BMS1Q14692 1282 aaKnown RBP12.42□□□□□ -0.42
PFDN1-201ENST00000261813 KRT31Q15323 416 aa12.42□□□□□ -0.42
PFDN1-201ENST00000261813 PSMD5Q16401 504 aa12.42□□□□□ -0.42
PFDN1-201ENST00000261813 TCERG1LQ5VWI1 586 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms