RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 PDGFRAP16234 1089 aa11.32□□□□□ -0.6
CSNK1A1-201ENST00000261798 EPHB2P29323 1055 aa11.32□□□□□ -0.6
CSNK1A1-201ENST00000261798 ROR2Q01974 943 aaKnown RBP11.32□□□□□ -0.6
CSNK1A1-201ENST00000261798 MROH9Q5TGP6 573 aa11.32□□□□□ -0.6
CSNK1A1-201ENST00000261798 C4orf22Q6V702 233 aa11.32□□□□□ -0.6
CSNK1A1-201ENST00000261798 CDC26Q8NHZ8 85 aa11.32□□□□□ -0.6
CSNK1A1-201ENST00000261798 SHCBP1LQ9BZQ2 653 aa11.32□□□□□ -0.6
CSNK1A1-201ENST00000261798 SAR1AQ9NR31 198 aa11.32□□□□□ -0.6
CSNK1A1-201ENST00000261798 RFC5P40937 340 aa11.32□□□□□ -0.6
CSNK1A1-201ENST00000261798 ZNF662Q6ZS27 426 aa11.32□□□□□ -0.6
CSNK1A1-201ENST00000261798 MRPL4Q9BYD3 311 aaKnown RBP11.32□□□□□ -0.6
CSNK1A1-201ENST00000261798 METTL5Q9NRN9 209 aaKnown RBP11.32□□□□□ -0.6
CSNK1A1-201ENST00000261798 CYP39A1Q9NYL5 469 aa11.32□□□□□ -0.6
CSNK1A1-201ENST00000261798 MYBL2P10244 700 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 CDH2P19022 906 aaPredicted RBP11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 YWHABP31946 246 aaKnown RBP11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 SERPINB8P50452 374 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 STX5Q13190 355 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 TSTA3Q13630 321 aaPredicted RBP11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 C11orf63Q6NUN7 778 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 TMCO5AQ8N6Q1 288 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 AGPAT3Q9NRZ7 376 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 FEM1BQ9UK73 627 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 ADGRA3Q8IWK6 1321 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 ZNF335Q9H4Z2 1342 aaPredicted RBP11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 TBC1D4O60343 1298 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 ATP4AP20648 1035 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 PLOD1Q02809 727 aaPredicted RBP11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 ZNF786Q8N393 782 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 DCPSQ96C86 337 aaKnown RBP11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 ZNF184Q99676 751 aaPredicted RBP11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 TASP1Q9H6P5 420 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 BTBD7Q9P203 1132 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 PCDHGC5Q9Y5F6 944 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 ATXN2Q99700 1313 aaKnown RBP11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 CEMIPQ8WUJ3 1361 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 GTPBP10A4D1E9 387 aaKnown RBP11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 AASDHQ4L235 1098 aaPredicted RBP11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 IYDQ6PHW0 289 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 FRA10AC1Q70Z53 315 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 IFNEQ86WN2 208 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 PTPRUQ92729 1446 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 CNDP1Q96KN2 507 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 C2orf40Q9H1Z8 148 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 ZNF212Q9UDV6 495 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 C2CD2Q9Y426 696 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 PCDHA10Q9Y5I2 948 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 AQP5P55064 265 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 PDIA6Q15084 440 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 CCNG2Q16589 344 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 SWSAP1Q6NVH7 229 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 OR6P1Q8NGX9 317 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 TMEM237Q96Q45 408 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 PAFAH2Q99487 392 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 NPR1P16066 1061 aa11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 USP10Q14694 798 aaKnown RBP11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 OASLQ15646 514 aaKnown RBP11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 DUSP9Q99956 384 aaKnown RBP11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 FRMD8P1Q9BZ68 369 aaPredicted RBP11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 CORO1CQ9ULV4 474 aaPredicted RBP11.31□□□□□ -0.6
CSNK1A1-201ENST00000261798 DGKIO75912 1065 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 CACNB3P54284 484 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 NSUN2Q08J23 767 aaKnown RBP eCLIP11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 PRCCQ92733 491 aaPredicted RBP11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 EFCAB1Q9HAE3 211 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 RASA1P20936 1047 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 AMPD2Q01433 879 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 IMPG1Q17R60 797 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 SH3RF1Q7Z6J0 888 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 FAM71DQ8N9W8 422 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 FBXO36Q8NEA4 188 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 ULK4Q96C45 1275 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 ILKAPQ9H0C8 392 aaPredicted RBP11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 ATP8B3O60423 1300 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 DLC1Q96QB1 1528 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 MYO3AQ8NEV4 1616 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 ARHGEF37A1IGU5 675 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 FAM196BA6NMK8 535 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 GLRA3O75311 464 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 AP1G2O75843 785 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 POLBP06746 335 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 CRKP46108 304 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 NCOA4Q13772 614 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 NSUN6Q8TEA1 469 aaKnown RBP11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 A0A0U1RQJ8 604 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 UNC5CO95185 931 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 ALBP02768 609 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 RPL21P46778 160 aaKnown RBP11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 ANGPTL8Q6UXH0 198 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 TERB1Q8NA31 727 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 KRT35Q92764 455 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 ZNF341Q9BYN7 854 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 MYLK2Q9H1R3 596 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 TOPORSQ9NS56 1045 aaPredicted RBP11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 FAM8A1Q9UBU6 413 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 BNC2Q6ZN30 1099 aaPredicted RBP11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 NUP93Q8N1F7 819 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 MPP4Q96JB8 637 aa11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 FAM217BQ9NTX9 383 aaPredicted RBP11.3□□□□□ -0.6
CSNK1A1-201ENST00000261798 SRP68Q9UHB9 627 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms