RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 MAP3K10Q02779 954 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 ZNF268Q14587 947 aaPredicted RBP15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 PGM5Q15124 567 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 SCARA3Q6AZY7 606 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 PPP1R21Q6ZMI0 780 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 SMC6Q96SB8 1091 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 TMEM121Q9BTD3 319 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 MYLK2Q9H1R3 596 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 PHTF1Q9UMS5 762 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 C15orf41Q9Y2V0 281 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 UBIAD1Q9Y5Z9 338 aa15.3■□□□□ 0.04
SFSWAP-201ENST00000261674 VWA5AO00534 786 aa15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 ZNF862O60290 1169 aa15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 MAPTP10636 758 aaKnown RBP15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 HSD17B4P51659 736 aa15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 HTRA3P83110 453 aa15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 NFX1Q12986 1120 aaKnown RBP15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 PDIA2Q13087 525 aaKnown RBP15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 TMEM132BQ14DG7 1078 aa15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 CGB2Q6NT52 195 aa15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 MFSD7Q6UXD7 560 aa15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 ANKRD13AQ8IZ07 590 aa15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 LRRC8CQ8TDW0 803 aa15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 L3MBTL3Q96JM7 780 aaPredicted RBP15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 MAGEB18Q96M61 343 aa15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 LRRC37BQ96QE4 947 aa15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 PCDHA10Q9Y5I2 948 aa15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 UMODL1Q5DID0 1318 aa15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 A0A1W2PPM1 405 aa15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 F8VP50 259 aa15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 RPA3P35244 121 aaPredicted RBP15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 OVGP1Q12889 678 aa15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 STAT4Q14765 748 aa15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 CCNG2Q16589 344 aa15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 ZBTB41Q5SVQ8 909 aa15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 CFAP57Q96MR6 1250 aa15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 COQ4Q9Y3A0 265 aa15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 FOCADQ5VW36 1801 aa15.29■□□□□ 0.04
SFSWAP-201ENST00000261674 ZBED4O75132 1171 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 CBX6O95503 412 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 PGK2P07205 417 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 HUNKP57058 714 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 MAMLD1Q13495 774 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 SMTNL2Q2TAL5 461 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 POLR3FQ9H1D9 316 aaPredicted RBP15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 IVNS1ABPQ9Y6Y0 642 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 WDR46O15213 610 aaKnown RBP15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 SLC1A1P43005 524 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 SESN3P58005 492 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 CAV1Q03135 178 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 TCEAL1Q15170 157 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 TMEM63BQ5T3F8 832 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 TDRD10Q5VZ19 366 aaKnown RBP15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 TXNRD3NBQ6F5E7 133 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 ZNF668Q96K58 619 aaPredicted RBP15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 FAM81BQ96LP2 452 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 MCEEQ96PE7 176 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 PDCD2LQ9BRP1 358 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 PEX19P40855 299 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 ERFP50548 548 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 MTFR1Q15390 333 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 SCARA5Q6ZMJ2 495 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 RBBP8NLQ8NC74 664 aaPredicted RBP15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 MAGEC3Q8TD91 643 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 MFSD14AQ96MC6 490 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 TARS2Q9BW92 718 aaKnown RBP15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 ZWILCHQ9H900 591 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 KIAA1586Q9HCI6 787 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 MRPL47Q9HD33 250 aaKnown RBP15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 RNF146Q9NTX7 359 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 ZNF112Q9UJU3 913 aa15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 AGO2Q9UKV8 859 aaKnown RBP15.28■□□□□ 0.04
SFSWAP-201ENST00000261674 OAS1P00973 400 aaKnown RBP15.27■□□□□ 0.04
SFSWAP-201ENST00000261674 FSTL1Q12841 308 aa15.27■□□□□ 0.04
SFSWAP-201ENST00000261674 KCNT1Q5JUK3 1230 aa15.27■□□□□ 0.04
SFSWAP-201ENST00000261674 EP400NLQ6ZTU2 488 aa15.27■□□□□ 0.04
SFSWAP-201ENST00000261674 TMC2Q8TDI7 906 aa15.27■□□□□ 0.04
SFSWAP-201ENST00000261674 NPHS2Q9NP85 383 aa15.27■□□□□ 0.04
SFSWAP-201ENST00000261674 AGTPBP1Q9UPW5 1226 aa15.27■□□□□ 0.04
SFSWAP-201ENST00000261674 SSTR1P30872 391 aa15.27■□□□□ 0.03
SFSWAP-201ENST00000261674 BPIFB4P59827 614 aa15.27■□□□□ 0.03
SFSWAP-201ENST00000261674 CNTN2Q02246 1040 aa15.27■□□□□ 0.03
SFSWAP-201ENST00000261674 GCNT1Q02742 428 aa15.27■□□□□ 0.03
SFSWAP-201ENST00000261674 GAD2Q05329 585 aa15.27■□□□□ 0.03
SFSWAP-201ENST00000261674 SPARCL1Q14515 664 aa15.27■□□□□ 0.03
SFSWAP-201ENST00000261674 Q3C1V9 767 aa15.27■□□□□ 0.03
SFSWAP-201ENST00000261674 GALNTL6Q49A17 601 aa15.27■□□□□ 0.03
SFSWAP-201ENST00000261674 CYP4A22Q5TCH4 519 aa15.27■□□□□ 0.03
SFSWAP-201ENST00000261674 ZBTB33Q86T24 672 aa15.27■□□□□ 0.03
SFSWAP-201ENST00000261674 GPBP1L1Q9HC44 474 aaPredicted RBP15.27■□□□□ 0.03
SFSWAP-201ENST00000261674 RBAKQ9NYW8 714 aaPredicted RBP15.27■□□□□ 0.03
SFSWAP-201ENST00000261674 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.27■□□□□ 0.03
SFSWAP-201ENST00000261674 PTPRJQ12913 1337 aa15.27■□□□□ 0.03
SFSWAP-201ENST00000261674 KRT4P19013 534 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 ALDH3A1P30838 453 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 JAK3P52333 1124 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 POLGP54098 1239 aaPredicted RBP15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 KRT76Q01546 638 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 SLC1A5Q15758 541 aa15.26■□□□□ 0.03
SFSWAP-201ENST00000261674 CST9Q5W186 159 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms