RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 MCCD1P59942 119 aaPredicted RBP18.01■□□□□ 0.47
SDCBP-201ENST00000260130 BIRC3Q13489 604 aa18.01■□□□□ 0.47
SDCBP-201ENST00000260130 TRPC3Q13507 836 aa18.01■□□□□ 0.47
SDCBP-201ENST00000260130 C1orf220Q5T0J3 134 aa18.01■□□□□ 0.47
SDCBP-201ENST00000260130 PTCRAQ6ISU1 281 aaPredicted RBP18.01■□□□□ 0.47
SDCBP-201ENST00000260130 ELMSAN1Q6PJG2 1045 aa18.01■□□□□ 0.47
SDCBP-201ENST00000260130 SARM1Q6SZW1 724 aa18.01■□□□□ 0.47
SDCBP-201ENST00000260130 METTL23Q86XA0 190 aa18.01■□□□□ 0.47
SDCBP-201ENST00000260130 MLKLQ8NB16 471 aa18.01■□□□□ 0.47
SDCBP-201ENST00000260130 DUSP9Q99956 384 aaKnown RBP18.01■□□□□ 0.47
SDCBP-201ENST00000260130 S1PR5Q9H228 398 aa18.01■□□□□ 0.47
SDCBP-201ENST00000260130 PLEKHA4Q9H4M7 779 aa18.01■□□□□ 0.47
SDCBP-201ENST00000260130 VCANP13611 3396 aa18.01■□□□□ 0.47
SDCBP-201ENST00000260130 HUS1O60921 280 aa18■□□□□ 0.47
SDCBP-201ENST00000260130 STX17P56962 302 aa18■□□□□ 0.47
SDCBP-201ENST00000260130 TJAP1Q5JTD0 557 aa18■□□□□ 0.47
SDCBP-201ENST00000260130 TDRD10Q5VZ19 366 aaKnown RBP18■□□□□ 0.47
SDCBP-201ENST00000260130 KREMEN2Q8NCW0 462 aa18■□□□□ 0.47
SDCBP-201ENST00000260130 SNX9Q9Y5X1 595 aa18■□□□□ 0.47
SDCBP-201ENST00000260130 GRXCR2A6NFK2 248 aa18■□□□□ 0.47
SDCBP-201ENST00000260130 SPDYE4A6NLX3 237 aa18■□□□□ 0.47
SDCBP-201ENST00000260130 SLC16A3O15427 465 aaKnown RBP18■□□□□ 0.47
SDCBP-201ENST00000260130 MBTPS2O43462 519 aa18■□□□□ 0.47
SDCBP-201ENST00000260130 BMP1P13497 986 aa18■□□□□ 0.47
SDCBP-201ENST00000260130 ARPP19P56211 112 aa18■□□□□ 0.47
SDCBP-201ENST00000260130 ROR1Q01973 937 aa18■□□□□ 0.47
SDCBP-201ENST00000260130 SMAD4Q13485 552 aaKnown RBP18■□□□□ 0.47
SDCBP-201ENST00000260130 WSCD1Q658N2 575 aa18■□□□□ 0.47
SDCBP-201ENST00000260130 SV2AQ7L0J3 742 aa18■□□□□ 0.47
SDCBP-201ENST00000260130 C12orf76Q8N812 135 aaPredicted RBP18■□□□□ 0.47
SDCBP-201ENST00000260130 ZNF461Q8TAF7 563 aa18■□□□□ 0.47
SDCBP-201ENST00000260130 CEP63Q96MT8 703 aa18■□□□□ 0.47
SDCBP-201ENST00000260130 APOL5Q9BWW9 433 aa18■□□□□ 0.47
SDCBP-201ENST00000260130 SCN1AP35498 2009 aa17.99■□□□□ 0.47
SDCBP-201ENST00000260130 TRIM49P0CI25 452 aa17.99■□□□□ 0.47
SDCBP-201ENST00000260130 TRIM49CP0CI26 452 aa17.99■□□□□ 0.47
SDCBP-201ENST00000260130 ZACNQ401N2 412 aa17.99■□□□□ 0.47
SDCBP-201ENST00000260130 FILIP1Q7Z7B0 1213 aa17.99■□□□□ 0.47
SDCBP-201ENST00000260130 SFXN1Q9H9B4 322 aa17.99■□□□□ 0.47
SDCBP-201ENST00000260130 FBXW11Q9UKB1 542 aa17.99■□□□□ 0.47
SDCBP-201ENST00000260130 FAM50BQ9Y247 325 aa17.99■□□□□ 0.47
SDCBP-201ENST00000260130 OR6C75A6NL08 312 aa17.98■□□□□ 0.47
SDCBP-201ENST00000260130 RIOK3O14730 519 aaKnown RBP17.98■□□□□ 0.47
SDCBP-201ENST00000260130 ABLIM3O94929 683 aa17.98■□□□□ 0.47
SDCBP-201ENST00000260130 ATICP31939 592 aa17.98■□□□□ 0.47
SDCBP-201ENST00000260130 MYL6P60660 151 aa17.98■□□□□ 0.47
SDCBP-201ENST00000260130 ITIH3Q06033 890 aa17.98■□□□□ 0.47
SDCBP-201ENST00000260130 IQCB1Q15051 598 aa17.98■□□□□ 0.47
SDCBP-201ENST00000260130 ADAM7Q9H2U9 754 aa17.98■□□□□ 0.47
SDCBP-201ENST00000260130 RWDD2AQ9UIY3 292 aa17.98■□□□□ 0.47
SDCBP-201ENST00000260130 L1RE1Q9UN81 338 aa17.98■□□□□ 0.47
SDCBP-201ENST00000260130 WDR27A2RRH5 827 aa17.98■□□□□ 0.47
SDCBP-201ENST00000260130 STAU1O95793 577 aaKnown RBP17.98■□□□□ 0.47
SDCBP-201ENST00000260130 GCLMP48507 274 aa17.98■□□□□ 0.47
SDCBP-201ENST00000260130 NLRP12P59046 1061 aa17.98■□□□□ 0.47
SDCBP-201ENST00000260130 PPP3CAQ08209 521 aa17.98■□□□□ 0.47
SDCBP-201ENST00000260130 NCOA4Q13772 614 aa17.98■□□□□ 0.47
SDCBP-201ENST00000260130 RARS2Q5T160 578 aaKnown RBP17.98■□□□□ 0.47
SDCBP-201ENST00000260130 CES5AQ6NT32 575 aa17.98■□□□□ 0.47
SDCBP-201ENST00000260130 C15orf39Q6ZRI6 1047 aa17.98■□□□□ 0.47
SDCBP-201ENST00000260130 DPH6Q7L8W6 267 aa17.98■□□□□ 0.47
SDCBP-201ENST00000260130 THEM5Q8N1Q8 247 aa17.98■□□□□ 0.47
SDCBP-201ENST00000260130 TMEM86AQ8N2M4 240 aa17.98■□□□□ 0.47
SDCBP-201ENST00000260130 PDCL2Q8N4E4 241 aa17.98■□□□□ 0.47
SDCBP-201ENST00000260130 TOP6BLQ8N6T0 577 aa17.98■□□□□ 0.47
SDCBP-201ENST00000260130 XYLT2Q9H1B5 865 aa17.98■□□□□ 0.47
SDCBP-201ENST00000260130 ARMCX3Q9UH62 379 aaPredicted RBP17.98■□□□□ 0.47
SDCBP-201ENST00000260130 USP15Q9Y4E8 981 aaPredicted RBP17.98■□□□□ 0.47
SDCBP-201ENST00000260130 VNN1O95497 513 aa17.97■□□□□ 0.47
SDCBP-201ENST00000260130 CPB1P15086 417 aa17.97■□□□□ 0.47
SDCBP-201ENST00000260130 GTF2H1P32780 548 aa17.97■□□□□ 0.47
SDCBP-201ENST00000260130 WDR72Q3MJ13 1102 aa17.97■□□□□ 0.47
SDCBP-201ENST00000260130 TPGS2Q68CL5 300 aa17.97■□□□□ 0.47
SDCBP-201ENST00000260130 TMC5Q6UXY8 1006 aa17.97■□□□□ 0.47
SDCBP-201ENST00000260130 MRFAP1L1Q96HT8 127 aa17.97■□□□□ 0.47
SDCBP-201ENST00000260130 METTL14Q9HCE5 456 aaKnown RBP17.97■□□□□ 0.47
SDCBP-201ENST00000260130 ANO10Q9NW15 660 aa17.97■□□□□ 0.47
SDCBP-201ENST00000260130 IL9P15248 144 aa17.97■□□□□ 0.47
SDCBP-201ENST00000260130 ATF2P15336 505 aa17.97■□□□□ 0.47
SDCBP-201ENST00000260130 SMAD2Q15796 467 aaKnown RBP17.97■□□□□ 0.47
SDCBP-201ENST00000260130 SOWAHAQ2M3V2 549 aa17.97■□□□□ 0.47
SDCBP-201ENST00000260130 DPCR1Q3MIW9 517 aa17.97■□□□□ 0.47
SDCBP-201ENST00000260130 LIN9Q5TKA1 542 aa17.97■□□□□ 0.47
SDCBP-201ENST00000260130 FRMD5Q7Z6J6 570 aa17.97■□□□□ 0.47
SDCBP-201ENST00000260130 CMASQ8NFW8 434 aaPredicted RBP17.97■□□□□ 0.47
SDCBP-201ENST00000260130 MMS19Q96T76 1030 aa17.97■□□□□ 0.47
SDCBP-201ENST00000260130 RTP3Q9BQQ7 232 aa17.97■□□□□ 0.47
SDCBP-201ENST00000260130 SRRTQ9BXP5 876 aaKnown RBP17.97■□□□□ 0.47
SDCBP-201ENST00000260130 MMRN2Q9H8L6 949 aa17.97■□□□□ 0.47
SDCBP-201ENST00000260130 VRTNQ9H8Y1 702 aa17.97■□□□□ 0.47
SDCBP-201ENST00000260130 ZDHHC7Q9NXF8 308 aa17.97■□□□□ 0.47
SDCBP-201ENST00000260130 CCDC195A0A1B0GUA6 201 aa17.96■□□□□ 0.47
SDCBP-201ENST00000260130 CTIFO43310 598 aaKnown RBP17.96■□□□□ 0.47
SDCBP-201ENST00000260130 STX10O60499 249 aa17.96■□□□□ 0.47
SDCBP-201ENST00000260130 RFPL2O75678 378 aa17.96■□□□□ 0.47
SDCBP-201ENST00000260130 ZMYND10O75800 440 aa17.96■□□□□ 0.47
SDCBP-201ENST00000260130 OR4Q2P0C623 313 aa17.96■□□□□ 0.47
SDCBP-201ENST00000260130 LRMPQ12912 555 aa17.96■□□□□ 0.47
SDCBP-201ENST00000260130 SGSM1Q2NKQ1 1148 aa17.96■□□□□ 0.47
SDCBP-201ENST00000260130 LIMS2Q7Z4I7 341 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms