RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 ANK1P16157 1881 aa16.66■□□□□ 0.26
GYPC-201ENST00000259254 KLHL30Q0D2K2 578 aa16.66■□□□□ 0.26
GYPC-201ENST00000259254 SOWAHAQ2M3V2 549 aa16.66■□□□□ 0.26
GYPC-201ENST00000259254 ZNF394Q53GI3 561 aa16.66■□□□□ 0.26
GYPC-201ENST00000259254 METTL23Q86XA0 190 aa16.66■□□□□ 0.26
GYPC-201ENST00000259254 SYN2Q92777 582 aaPredicted RBP16.66■□□□□ 0.26
GYPC-201ENST00000259254 SLC28A3Q9HAS3 691 aa16.66■□□□□ 0.26
GYPC-201ENST00000259254 AAASQ9NRG9 546 aa16.66■□□□□ 0.26
GYPC-201ENST00000259254 PUF60Q9UHX1 559 aaKnown RBP16.66■□□□□ 0.26
GYPC-201ENST00000259254 ADAM28Q9UKQ2 775 aa16.66■□□□□ 0.26
GYPC-201ENST00000259254 TIMM13Q9Y5L4 95 aaPredicted RBP16.66■□□□□ 0.26
GYPC-201ENST00000259254 MYO9BQ13459 2157 aa16.65■□□□□ 0.26
GYPC-201ENST00000259254 CITO14578 2027 aa16.65■□□□□ 0.26
GYPC-201ENST00000259254 MYOGP15173 224 aa16.65■□□□□ 0.26
GYPC-201ENST00000259254 AARSP49588 968 aaKnown RBP eCLIP16.65■□□□□ 0.261e-6■■■■□ 20.6
GYPC-201ENST00000259254 WSCD1Q658N2 575 aa16.65■□□□□ 0.26
GYPC-201ENST00000259254 E4F1Q66K89 784 aaPredicted RBP16.65■□□□□ 0.26
GYPC-201ENST00000259254 KCNT2Q6UVM3 1135 aa16.65■□□□□ 0.26
GYPC-201ENST00000259254 CD300LGQ6UXG3 332 aa16.65■□□□□ 0.26
GYPC-201ENST00000259254 DPH6Q7L8W6 267 aa16.65■□□□□ 0.26
GYPC-201ENST00000259254 LRRC8AQ8IWT6 810 aa16.65■□□□□ 0.26
GYPC-201ENST00000259254 FAM71AQ8IYT1 594 aa16.65■□□□□ 0.26
GYPC-201ENST00000259254 TMEM86AQ8N2M4 240 aa16.65■□□□□ 0.26
GYPC-201ENST00000259254 PDCL2Q8N4E4 241 aa16.65■□□□□ 0.26
GYPC-201ENST00000259254 UBR7Q8N806 425 aa16.65■□□□□ 0.26
GYPC-201ENST00000259254 COLGALT1Q8NBJ5 622 aa16.65■□□□□ 0.26
GYPC-201ENST00000259254 TRIM44Q96DX7 344 aaPredicted RBP16.65■□□□□ 0.26
GYPC-201ENST00000259254 SUSD3Q96L08 255 aa16.65■□□□□ 0.26
GYPC-201ENST00000259254 BAG1Q99933 345 aaPredicted RBP16.65■□□□□ 0.26
GYPC-201ENST00000259254 DNAI2Q9GZS0 605 aa16.65■□□□□ 0.26
GYPC-201ENST00000259254 MARCH5Q9NX47 278 aa16.65■□□□□ 0.26
GYPC-201ENST00000259254 AIPL1Q9NZN9 384 aa16.65■□□□□ 0.26
GYPC-201ENST00000259254 DSEQ9UL01 958 aa16.65■□□□□ 0.26
GYPC-201ENST00000259254 BARX2Q9UMQ3 279 aaPredicted RBP16.65■□□□□ 0.26
GYPC-201ENST00000259254 PCDHB8Q9UN66 801 aa16.65■□□□□ 0.26
GYPC-201ENST00000259254 SF3B1O75533 1304 aaKnown RBP eCLIP16.65■□□□□ 0.269e-6■■■■■ 68.9
GYPC-201ENST00000259254 TTC3P53804 2025 aa16.64■□□□□ 0.25
GYPC-201ENST00000259254 CARNS1A5YM72 827 aa16.64■□□□□ 0.25
GYPC-201ENST00000259254 A8MXQ7 604 aa16.64■□□□□ 0.25
GYPC-201ENST00000259254 TACC1O75410 805 aa16.64■□□□□ 0.25
GYPC-201ENST00000259254 SERPING1P05155 500 aa16.64■□□□□ 0.25
GYPC-201ENST00000259254 SKILP12757 684 aa16.64■□□□□ 0.25
GYPC-201ENST00000259254 CD19P15391 556 aa16.64■□□□□ 0.25
GYPC-201ENST00000259254 WARSP23381 471 aaKnown RBP16.64■□□□□ 0.25
GYPC-201ENST00000259254 GNL1P36915 607 aaPredicted RBP16.64■□□□□ 0.25
GYPC-201ENST00000259254 PDE6CP51160 858 aa16.64■□□□□ 0.25
GYPC-201ENST00000259254 NDST1P52848 882 aa16.64■□□□□ 0.25
GYPC-201ENST00000259254 BPIFB4P59827 614 aa16.64■□□□□ 0.25
GYPC-201ENST00000259254 PTK2Q05397 1052 aa16.64■□□□□ 0.25
GYPC-201ENST00000259254 ELAVL2Q12926 359 aaKnown RBP16.64■□□□□ 0.25
GYPC-201ENST00000259254 ORC1Q13415 861 aa16.64■□□□□ 0.25
GYPC-201ENST00000259254 PPP2R2DQ66LE6 453 aa16.64■□□□□ 0.25
GYPC-201ENST00000259254 FUT10Q6P4F1 479 aa16.64■□□□□ 0.25
GYPC-201ENST00000259254 CCDC112Q8NEF3 446 aa16.64■□□□□ 0.25
GYPC-201ENST00000259254 TMEM169Q96HH4 297 aa16.64■□□□□ 0.25
GYPC-201ENST00000259254 PRDM12Q9H4Q4 367 aa16.64■□□□□ 0.25
GYPC-201ENST00000259254 FAM124BQ9H5Z6 455 aaPredicted RBP16.64■□□□□ 0.25
GYPC-201ENST00000259254 HMGXB4Q9UGU5 601 aa16.64■□□□□ 0.25
GYPC-201ENST00000259254 PCDHB12Q9Y5F1 795 aa16.64■□□□□ 0.25
GYPC-201ENST00000259254 M0QZQ0 153 aa16.63■□□□□ 0.25
GYPC-201ENST00000259254 CILPO75339 1184 aa16.63■□□□□ 0.25
GYPC-201ENST00000259254 HNRNPH3P31942 346 aaKnown RBP16.63■□□□□ 0.25
GYPC-201ENST00000259254 INCA1Q0VD86 236 aa16.63■□□□□ 0.25
GYPC-201ENST00000259254 FAM171A1Q5VUB5 890 aa16.63■□□□□ 0.25
GYPC-201ENST00000259254 CYP26C1Q6V0L0 522 aa16.63■□□□□ 0.25
GYPC-201ENST00000259254 OSTM1Q86WC4 334 aa16.63■□□□□ 0.25
GYPC-201ENST00000259254 TMEM173Q86WV6 379 aaPredicted RBP16.63■□□□□ 0.25
GYPC-201ENST00000259254 CEP57Q86XR8 500 aa16.63■□□□□ 0.25
GYPC-201ENST00000259254 SLC39A11Q8N1S5 342 aa16.63■□□□□ 0.25
GYPC-201ENST00000259254 BCL7CQ8WUZ0 217 aaPredicted RBP16.63■□□□□ 0.25
GYPC-201ENST00000259254 KBTBD7Q8WVZ9 684 aa16.63■□□□□ 0.25
GYPC-201ENST00000259254 ZNF830Q96NB3 372 aaPredicted RBP16.63■□□□□ 0.25
GYPC-201ENST00000259254 GAS2L1Q99501 681 aaPredicted RBP16.63■□□□□ 0.25
GYPC-201ENST00000259254 NT5C1AQ9BXI3 368 aa16.63■□□□□ 0.25
GYPC-201ENST00000259254 ELOVL4Q9GZR5 314 aa16.63■□□□□ 0.25
GYPC-201ENST00000259254 DEF6Q9H4E7 631 aa16.63■□□□□ 0.25
GYPC-201ENST00000259254 HAUS4Q9H6D7 363 aa16.63■□□□□ 0.25
GYPC-201ENST00000259254 SPG21Q9NZD8 308 aa16.63■□□□□ 0.25
GYPC-201ENST00000259254 EYSQ5T1H1 3165 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 LCHNA4D1U4 455 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 THAP12O43422 761 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 CALCAP01258 141 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 PDGFRBP09619 1106 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 FAM163BP0C2L3 166 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 TYMPP19971 482 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 TKTP29401 623 aaKnown RBP16.62■□□□□ 0.25
GYPC-201ENST00000259254 GNA15P30679 374 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 CLCN1P35523 988 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 PPM1AP35813 382 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 LHX1P48742 406 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 MEA1Q16626 185 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 TAF3Q5VWG9 929 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 OVOS1Q6IE37 1185 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 WDR59Q6PJI9 974 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 LIMS2Q7Z4I7 341 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 IRF2BP2Q7Z5L9 587 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 SLC47A2Q86VL8 602 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 UNC93AQ86WB7 457 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 TMTC1Q8IUR5 882 aa16.62■□□□□ 0.25
GYPC-201ENST00000259254 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms