RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 PPARGP37231 505 aaPredicted RBP8.13□□□□□ -1.11
GPNMB-201ENST00000258733 ERFP50548 548 aa8.13□□□□□ -1.11
GPNMB-201ENST00000258733 HK2P52789 917 aa8.13□□□□□ -1.11
GPNMB-201ENST00000258733 SLC12A2P55011 1212 aa8.13□□□□□ -1.11
GPNMB-201ENST00000258733 CYP4F2P78329 520 aa8.13□□□□□ -1.11
GPNMB-201ENST00000258733 CYP4F3Q08477 520 aa8.13□□□□□ -1.11
GPNMB-201ENST00000258733 CD300CQ08708 224 aa8.13□□□□□ -1.11
GPNMB-201ENST00000258733 SNTA1Q13424 505 aa8.13□□□□□ -1.11
GPNMB-201ENST00000258733 LAMC2Q13753 1193 aa8.13□□□□□ -1.11
GPNMB-201ENST00000258733 ITIH4Q14624 930 aa8.13□□□□□ -1.11
GPNMB-201ENST00000258733 ABRAXAS1Q6UWZ7 409 aa8.13□□□□□ -1.11
GPNMB-201ENST00000258733 DTHD1Q6ZMT9 781 aa8.13□□□□□ -1.11
GPNMB-201ENST00000258733 DEPDC4Q8N2C3 294 aa8.13□□□□□ -1.11
GPNMB-201ENST00000258733 HES6Q96HZ4 224 aa8.13□□□□□ -1.11
GPNMB-201ENST00000258733 CNDP2Q96KP4 475 aaKnown RBP8.13□□□□□ -1.11
GPNMB-201ENST00000258733 EIF2AK1Q9BQI3 630 aaKnown RBP8.13□□□□□ -1.11
GPNMB-201ENST00000258733 DDX23Q9BUQ8 820 aaKnown RBP8.13□□□□□ -1.11
GPNMB-201ENST00000258733 CINPQ9BW66 212 aaPredicted RBP8.13□□□□□ -1.11
GPNMB-201ENST00000258733 UCK1Q9HA47 277 aa8.13□□□□□ -1.11
GPNMB-201ENST00000258733 SP110Q9HB58 689 aa8.13□□□□□ -1.11
GPNMB-201ENST00000258733 NGRNQ9NPE2 291 aaKnown RBP8.13□□□□□ -1.11
GPNMB-201ENST00000258733 POLE3Q9NRF9 147 aa8.13□□□□□ -1.11
GPNMB-201ENST00000258733 IFNKQ9P0W0 207 aa8.13□□□□□ -1.11
GPNMB-201ENST00000258733 APOBEC2Q9Y235 224 aaKnown RBP8.13□□□□□ -1.11
GPNMB-201ENST00000258733 KDM5AP29375 1690 aaKnown RBP8.13□□□□□ -1.11
GPNMB-201ENST00000258733 NRXN1Q9ULB1 1477 aa8.13□□□□□ -1.11
GPNMB-201ENST00000258733 CPDO75976 1380 aa8.13□□□□□ -1.11
GPNMB-201ENST00000258733 PNPLA6Q8IY17 1366 aa8.13□□□□□ -1.11
GPNMB-201ENST00000258733 SOBPA7XYQ1 873 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 PSMD11O00231 422 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 PLOD2O00469 737 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 PEX1O43933 1283 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 TFRCP02786 760 aaKnown RBP8.12□□□□□ -1.11
GPNMB-201ENST00000258733 URODP06132 367 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 GDI2P50395 445 aaKnown RBP8.12□□□□□ -1.11
GPNMB-201ENST00000258733 SRP54P61011 504 aaKnown RBP8.12□□□□□ -1.11
GPNMB-201ENST00000258733 BEX3Q00994 111 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 C19orf57Q0VDD7 668 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 CCINQ13939 588 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 PLS1Q14651 629 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 SETMARQ53H47 684 aaPredicted RBP8.12□□□□□ -1.11
GPNMB-201ENST00000258733 HERC4Q5GLZ8 1057 aaPredicted RBP8.12□□□□□ -1.11
GPNMB-201ENST00000258733 C12orf60Q5U649 245 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 DCDC5Q6ZRR9 648 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 UBE3BQ7Z3V4 1068 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 RIC3Q7Z5B4 369 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 STX12Q86Y82 276 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 ZDHHC17Q8IUH5 632 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 KIF2BQ8N4N8 673 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 SLC17A8Q8NDX2 589 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 KCTD4Q8WVF5 259 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 LPPQ93052 612 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 OMA1Q96E52 524 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 GMCL1Q96IK5 515 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 ACAT2Q9BWD1 397 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 RHOBTB2Q9BYZ6 727 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 RAB17Q9H0T7 212 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 ASCC2Q9H1I8 757 aaPredicted RBP8.12□□□□□ -1.11
GPNMB-201ENST00000258733 EIF2B4Q9UI10 523 aaKnown RBP8.12□□□□□ -1.11
GPNMB-201ENST00000258733 BAG5Q9UL15 447 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 REREQ9P2R6 1566 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 PLCH2O75038 1416 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.12□□□□□ -1.11
GPNMB-201ENST00000258733 FAM170AA1A519 330 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 FYB1O15117 783 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 DLATP10515 647 aaKnown RBP8.12□□□□□ -1.11
GPNMB-201ENST00000258733 SOX6P35712 828 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 ARL1P40616 181 aaPredicted RBP8.12□□□□□ -1.11
GPNMB-201ENST00000258733 IFITM2Q01629 132 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 GCNT1Q02742 428 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 SCRN3Q0VDG4 424 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 ASIC2Q16515 512 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 LSM12Q3MHD2 195 aaKnown RBP8.12□□□□□ -1.11
GPNMB-201ENST00000258733 IQSEC1Q6DN90 963 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 IYDQ6PHW0 289 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 ADAMTSL2Q86TH1 951 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 DPP9Q86TI2 863 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 PRUNE1Q86TP1 453 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 PALM2Q8IXS6 379 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 ALLCQ8N6M5 410 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 ZBTB38Q8NAP3 1195 aaPredicted RBP8.12□□□□□ -1.11
GPNMB-201ENST00000258733 GALNT11Q8NCW6 608 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 ACTRT2Q8TDY3 377 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 PIGOQ8TEQ8 1089 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 SUCLG2Q96I99 432 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 CAPZA3Q96KX2 299 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 NUDCD1Q96RS6 583 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 LMAN2LQ9H0V9 348 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 USP29Q9HBJ7 922 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 SYTL2Q9HCH5 934 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 STOML1Q9UBI4 398 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 UBA2Q9UBT2 640 aaPredicted RBP8.12□□□□□ -1.11
GPNMB-201ENST00000258733 REV1Q9UBZ9 1251 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 POU2F3Q9UKI9 436 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 TNNQ9UQP3 1299 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 PCDHGA10Q9Y5H3 936 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 PIK3C2GO75747 1445 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 ARHGAP5Q13017 1502 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 PVALEFA0A1B0GWK0 134 aa8.12□□□□□ -1.11
GPNMB-201ENST00000258733 K7ENM7 598 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms