RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 SLC29A2Q14542 456 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 LBRQ14739 615 aaKnown RBP4.38□□□□□ -1.71
UBE4A-201ENST00000252108 ELMSAN1Q6PJG2 1045 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 ABHD15Q6UXT9 468 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 C4orf22Q6V702 233 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 KIAA0825Q8IV33 1275 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 ATP11CQ8NB49 1132 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 TMC2Q8TDI7 906 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 PIGOQ8TEQ8 1089 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 SLC20A1Q8WUM9 679 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 ART4Q93070 314 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 CNKSR1Q969H4 720 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 RNF25Q96BH1 459 aaPredicted RBP4.38□□□□□ -1.71
UBE4A-201ENST00000252108 LRRC19Q9H756 370 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 EBF2Q9HAK2 575 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 SPC25Q9HBM1 224 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 SLC12A4Q9UP95 1085 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 RIPK3Q9Y572 518 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 ALG6Q9Y672 507 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 COMMD10Q9Y6G5 202 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 IVNS1ABPQ9Y6Y0 642 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 ZNF541Q9H0D2 1346 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 ANKRD63C9JTQ0 380 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 FOXN3O00409 490 aaPredicted RBP4.38□□□□□ -1.71
UBE4A-201ENST00000252108 PSTPIP1O43586 416 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 CAND2O75155 1236 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 CNMDO75829 334 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 SNUPNO95149 360 aaKnown RBP4.38□□□□□ -1.71
UBE4A-201ENST00000252108 FTLP02792 175 aaPredicted RBP4.38□□□□□ -1.71
UBE4A-201ENST00000252108 CUL3Q13618 768 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 CLEC16AQ2KHT3 1053 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 CDCA2Q69YH5 1023 aaPredicted RBP4.38□□□□□ -1.71
UBE4A-201ENST00000252108 PALM2Q8IXS6 379 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 PARD3BQ8TEW8 1205 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 MZB1Q8WU39 189 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 KAT5Q92993 513 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 DDX27Q96GQ7 796 aaKnown RBP4.38□□□□□ -1.71
UBE4A-201ENST00000252108 FAM210AQ96ND0 272 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 SIKE1Q9BRV8 207 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 GOLPH3Q9H4A6 298 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 UBE2TQ9NPD8 197 aaPredicted RBP4.38□□□□□ -1.71
UBE4A-201ENST00000252108 PACSIN2Q9UNF0 486 aaPredicted RBP4.38□□□□□ -1.71
UBE4A-201ENST00000252108 SSX2IPQ9Y2D8 614 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 LRCH1Q9Y2L9 728 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 THSD7BQ9C0I4 1608 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 WDR46O15213 610 aaKnown RBP4.38□□□□□ -1.71
UBE4A-201ENST00000252108 NVLO15381 856 aaKnown RBP4.38□□□□□ -1.71
UBE4A-201ENST00000252108 TTC4O95801 387 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 ESRRAP11474 423 aaPredicted RBP4.38□□□□□ -1.71
UBE4A-201ENST00000252108 KRT5P13647 590 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 PLS3P13797 630 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 AP3M2P53677 418 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 SP2Q02086 613 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 KRT17Q04695 432 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 TMED2Q15363 201 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 SURF1Q15526 300 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 XRRA1Q6P2D8 792 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 MON1BQ7L1V2 547 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 MIGA2Q7L4E1 593 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 MIER3Q7Z3K6 550 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 KSR1Q8IVT5 923 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 RPUSD2Q8IZ73 545 aaKnown RBP4.38□□□□□ -1.71
UBE4A-201ENST00000252108 PDCD2LQ9BRP1 358 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 LXNQ9BS40 222 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 TMEM39BQ9GZU3 492 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 MRPL40Q9NQ50 206 aaKnown RBP4.38□□□□□ -1.71
UBE4A-201ENST00000252108 AVENQ9NQS1 362 aaPredicted RBP4.38□□□□□ -1.71
UBE4A-201ENST00000252108 PLXNA3P51805 1871 aa4.38□□□□□ -1.71
UBE4A-201ENST00000252108 TCRBV7S2A1N4TA0A589 114 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 C4BPAP04003 597 aaKnown RBP4.37□□□□□ -1.71
UBE4A-201ENST00000252108 CALB2P22676 271 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 CA4P22748 312 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 PTPN4P29074 926 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 VAMP7P51809 220 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 PLCB3Q01970 1234 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 MKRN4PQ13434 485 aaPredicted RBP4.37□□□□□ -1.71
UBE4A-201ENST00000252108 DGKZQ13574 1117 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 MTFR1Q15390 333 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 CNGA2Q16280 664 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 RASIP1Q5U651 963 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 CGB2Q6NT52 195 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 MAMDC4Q6UXC1 1216 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 SH2D5Q6ZV89 423 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 LIMS2Q7Z4I7 341 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 GLYCTKQ8IVS8 523 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 RCOR2Q8IZ40 523 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 PDCD7Q8N8D1 485 aaKnown RBP4.37□□□□□ -1.71
UBE4A-201ENST00000252108 LPAR1Q92633 364 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 KRT35Q92764 455 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 THOC1Q96FV9 657 aaKnown RBP4.37□□□□□ -1.71
UBE4A-201ENST00000252108 AGBL1Q96MI9 1066 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 CBWD1Q9BRT8 395 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 TRIM51Q9BSJ1 452 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 ZBED2Q9BTP6 218 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 PLAC1Q9HBJ0 212 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 SSU72Q9NP77 194 aaKnown RBP4.37□□□□□ -1.71
UBE4A-201ENST00000252108 ANKEF1Q9NU02 776 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 HACD3Q9P035 362 aa4.37□□□□□ -1.71
UBE4A-201ENST00000252108 PSMC3IPQ9P2W1 217 aaPredicted RBP4.37□□□□□ -1.71
UBE4A-201ENST00000252108 TM9SF1O15321 606 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms