RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 C16orf59Q7L2K0 433 aa13.81□□□□□ -0.2
LSM8-201ENST00000249299 CRYBG2Q8N1P7 616 aa13.81□□□□□ -0.2
LSM8-201ENST00000249299 RBBP8NLQ8NC74 664 aaPredicted RBP13.81□□□□□ -0.2
LSM8-201ENST00000249299 KIAA1524Q8TCG1 905 aa13.81□□□□□ -0.2
LSM8-201ENST00000249299 SUSD3Q96L08 255 aa13.81□□□□□ -0.2
LSM8-201ENST00000249299 NT5C1AQ9BXI3 368 aa13.81□□□□□ -0.2
LSM8-201ENST00000249299 OXCT2Q9BYC2 517 aaPredicted RBP13.81□□□□□ -0.2
LSM8-201ENST00000249299 RC3H2Q9HBD1 1191 aaKnown RBP13.81□□□□□ -0.2
LSM8-201ENST00000249299 GOLGA2P5Q9HBQ8 144 aa13.81□□□□□ -0.2
LSM8-201ENST00000249299 CASTOR2A6NHX0 329 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 TBKBP1A7MCY6 615 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 CYB561D2O14569 222 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 SYN3O14994 580 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 SPTLC1O15269 473 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 ZSCAN12O43309 604 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 MED7O43513 233 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 DDHD2O94830 711 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 WEE2P0C1S8 567 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 ODC1P11926 461 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 USP8P40818 1118 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 KIF11P52732 1056 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 CDR2Q01850 454 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 ARID5AQ03989 594 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 RAD9BQ6WBX8 426 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 ZNF365Q70YC5 407 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 ZNF571Q7Z3V5 609 aaPredicted RBP13.8□□□□□ -0.2
LSM8-201ENST00000249299 SLC30A5Q8TAD4 765 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 DDX1Q92499 740 aaKnown RBP13.8□□□□□ -0.2
LSM8-201ENST00000249299 TMEM176AQ96HP8 235 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 TNIP3Q96KP6 325 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 SENP8Q96LD8 212 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 ZNF830Q96NB3 372 aaPredicted RBP13.8□□□□□ -0.2
LSM8-201ENST00000249299 SLC9A7Q96T83 725 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 AGPAT1Q99943 283 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 ZNF518BQ9C0D4 1074 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 NRDE2Q9H7Z3 1164 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 NOCTQ9UK39 431 aaKnown RBP13.8□□□□□ -0.2
LSM8-201ENST00000249299 INTUQ9ULD6 942 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 POLIQ9UNA4 740 aa13.8□□□□□ -0.2
LSM8-201ENST00000249299 TET1Q8NFU7 2136 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 SOWAHDA6NJG2 315 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 KIF4AO95239 1232 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 LSM8O95777 96 aaKnown RBP13.79□□□□□ -0.2
LSM8-201ENST00000249299 CCDC175P0C221 793 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 VDRP11473 427 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 TNFAIP3P21580 790 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 GNL1P36915 607 aaPredicted RBP13.79□□□□□ -0.2
LSM8-201ENST00000249299 RAD23BP54727 409 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 HTRA4P83105 476 aaPredicted RBP13.79□□□□□ -0.2
LSM8-201ENST00000249299 RASIP1Q5U651 963 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 CD300LGQ6UXG3 332 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 DSTYKQ6XUX3 929 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 SLC47A2Q86VL8 602 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 METTL23Q86XA0 190 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 ZNF280BQ86YH2 543 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 GPR65Q8IYL9 337 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 ADGRF2Q8IZF7 708 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 PDCL2Q8N4E4 241 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 WHAMMQ8TF30 809 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 SNX25Q9H3E2 840 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 SMYD3Q9H7B4 428 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.79□□□□□ -0.22e-13■■■■■ 37.3
LSM8-201ENST00000249299 PCDHGC3Q9UN70 934 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 STXBP5LQ9Y2K9 1186 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 FAN1Q9Y2M0 1017 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 ADGRG1Q9Y653 693 aa13.79□□□□□ -0.2
LSM8-201ENST00000249299 PDCD11Q14690 1871 aaKnown RBP13.79□□□□□ -0.2
LSM8-201ENST00000249299 LTBP2Q14767 1821 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 GJB5O95377 273 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 GALTP07902 379 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 ACRP10323 421 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 PCSK1P29120 753 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 GNA15P30679 374 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 ALDH7A1P49419 539 aaKnown RBP13.78□□□□□ -0.2
LSM8-201ENST00000249299 NDST1P52848 882 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 CNGA2Q16280 664 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 TIGD5Q53EQ6 642 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 SCARA5Q6ZMJ2 495 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 OTOP2Q7RTS6 562 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 NOP9Q86U38 636 aaKnown RBP13.78□□□□□ -0.2
LSM8-201ENST00000249299 SLC4A11Q8NBS3 891 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 KBTBD7Q8WVZ9 684 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 ZNF606Q8WXB4 792 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 DPF3Q92784 378 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 SDCBP2Q9H190 292 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 LHX5Q9H2C1 402 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 ADAMTS1Q9UHI8 967 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 NAGPAQ9UK23 515 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 ADAM28Q9UKQ2 775 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 NENFQ9UMX5 172 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 L1RE1Q9UN81 338 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 INSL6Q9Y581 213 aa13.78□□□□□ -0.2
LSM8-201ENST00000249299 CCDC85CA6NKD9 419 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 A8MXQ7 604 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 DDX3XO00571 662 aaKnown RBP eCLIP13.77□□□□□ -0.215e-28■■■■□ 20.5
LSM8-201ENST00000249299 NRP1O14786 923 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 TADA2AO75478 443 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 OAZ2O95190 189 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 TUBB4AP04350 444 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 PLEKP08567 350 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms