RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 KRT1P04264 644 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 MMP8P22894 467 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 ENPEPQ07075 957 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 ZNF252P-AS1Q0IIN9 211 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 SGSM1Q2NKQ1 1148 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 HP1BP3Q5SSJ5 553 aaPredicted RBP16.69■□□□□ 0.26
LRFN1-201ENST00000248668 DENND1BQ6P3S1 775 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 NLRP14Q86W24 1093 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 ARFGAP2Q8N6H7 521 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 CDC42EP4Q9H3Q1 356 aaKnown RBP16.69■□□□□ 0.26
LRFN1-201ENST00000248668 DONSONQ9NYP3 566 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 HMGXB4Q9UGU5 601 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 FAM169AQ9Y6X4 670 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 DNAJC25-GNG10A0A024R161 153 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 ACKR2O00590 384 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 RGS16O15492 202 aaPredicted RBP16.69■□□□□ 0.26
LRFN1-201ENST00000248668 RIPK2O43353 540 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 LGR5O75473 907 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 PPIL2Q13356 520 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 WDTC1Q8N5D0 677 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 AFG1LQ8WV93 481 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 ANKRD36BP1Q96IX9 119 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 RPF1Q9H9Y2 349 aaKnown RBP16.69■□□□□ 0.26
LRFN1-201ENST00000248668 TP73O15350 636 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 ITGB3P05106 788 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 ZSCAN5DPP0CG00 497 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 EPHX2P34913 555 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 ASPAP45381 313 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 ZNF132P52740 706 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 GSCP56915 257 aaPredicted RBP16.69■□□□□ 0.26
LRFN1-201ENST00000248668 DYNLT1P63172 113 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 KCNV1Q6PIU1 500 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 MFSD7Q6UXD7 560 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 PLPPR4Q7Z2D5 763 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 RPAINQ86UA6 219 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 ERICH1Q86X53 443 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 EMC1Q8N766 993 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 GLIS1Q8NBF1 620 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 MYCBPAPQ8TBZ2 947 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 ZNF473Q8WTR7 871 aaKnown RBP16.69■□□□□ 0.26
LRFN1-201ENST00000248668 SMYD3Q9H7B4 428 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 C10orf88Q9H8K7 445 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 AAASQ9NRG9 546 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 PARP2Q9UGN5 583 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 SCINQ9Y6U3 715 aa16.69■□□□□ 0.26
LRFN1-201ENST00000248668 IGKV6-21A0A0C4DH24 114 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 ATF2P15336 505 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 ADCYAP1R1P41586 468 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 MBTD1Q05BQ5 628 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 C1QBPQ07021 282 aaKnown RBP16.68■□□□□ 0.26
LRFN1-201ENST00000248668 TMEM62Q0P6H9 643 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 KCNT1Q5JUK3 1230 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 AGBL2Q5U5Z8 902 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 HOOK3Q86VS8 718 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 C12orf50Q8NA57 414 aaPredicted RBP16.68■□□□□ 0.26
LRFN1-201ENST00000248668 JPH2Q9BR39 696 aaPredicted RBP16.68■□□□□ 0.26
LRFN1-201ENST00000248668 XYLT2Q9H1B5 865 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 KCNH4Q9UQ05 1017 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 ETS1P14921 441 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 ADCY1Q08828 1119 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 KYNUQ16719 465 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 SWT1Q5T5J6 900 aaKnown RBP16.68■□□□□ 0.26
LRFN1-201ENST00000248668 ZNF365Q70YC5 407 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 TMEM35BQ8NCS4 154 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 C2orf40Q9H1Z8 148 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 ZWILCHQ9H900 591 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 SAE1Q9UBE0 346 aaPredicted RBP16.68■□□□□ 0.26
LRFN1-201ENST00000248668 CTNNAL1Q9UBT7 734 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.68■□□□□ 0.26
LRFN1-201ENST00000248668 LRRD1A4D1F6 860 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 LACTBL1A8MY62 500 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 HBP1O60381 514 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 GAS8O95995 478 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 TFDP1Q14186 410 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 TSHZ1Q6ZSZ6 1077 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 TWNKQ96RR1 684 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 SPON1Q9HCB6 807 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 CNTN6Q9UQ52 1028 aa16.68■□□□□ 0.26
LRFN1-201ENST00000248668 LGALS2P05162 132 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 ADORA2AP29274 412 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 EIF3BP55884 814 aaKnown RBP16.67■□□□□ 0.26
LRFN1-201ENST00000248668 NFX1Q12986 1120 aaKnown RBP16.67■□□□□ 0.26
LRFN1-201ENST00000248668 JADE1Q6IE81 842 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 UBR7Q8N806 425 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 RAPGEF5Q92565 580 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 FZD8Q9H461 694 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 SYNCQ9H7C4 482 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 ERAP1Q9NZ08 941 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 CYTH4Q9UIA0 394 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 SIX4Q9UIU6 781 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 ANAPC5Q9UJX4 755 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 CLEC11AQ9Y240 323 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 TMEM191CA6NGB0 347 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 ITGBL1O95965 494 aaPredicted RBP16.67■□□□□ 0.26
LRFN1-201ENST00000248668 STAG3L1P0CL83 205 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 CDR1P51861 262 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 BIRC2Q13490 618 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 QPCTQ16769 361 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 CAPN12Q6ZSI9 719 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 C1orf127Q8N9H9 656 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms