RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 PLA2G12BQ9BX93 195 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 TTLL13PA6NNM8 815 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 H3BSA7 217 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 BMP3P12645 472 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 VARSP26640 1264 aaKnown RBP19.24■□□□□ 0.67
PTPN12-201ENST00000248594 STT3AP46977 705 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 CHN2P52757 468 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 MTTPP55157 894 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 SYDE2Q5VT97 1194 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 ACAP3Q96P50 834 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 WNT8AQ9H1J5 351 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 RANBP17Q9H2T7 1088 aaKnown RBP19.24■□□□□ 0.67
PTPN12-201ENST00000248594 USP29Q9HBJ7 922 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 GINM1Q9NU53 330 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 IL1RAPL1Q9NZN1 696 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 SMG5Q9UPR3 1016 aaKnown RBP19.24■□□□□ 0.67
PTPN12-201ENST00000248594 LRP6O75581 1613 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 ZMPSTE24O75844 475 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 RARBP10826 455 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 ALAS1P13196 640 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 MAPK4P31152 587 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 FXR2P51116 673 aaKnown RBP eCLIP19.24■□□□□ 0.676e-8■□□□□ 9.9
PTPN12-201ENST00000248594 SNAP25P60880 206 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 FOLH1Q04609 750 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 ARSHQ5FYA8 562 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 NCSTNQ92542 709 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 ACSF2Q96CM8 615 aaPredicted RBP19.24■□□□□ 0.67
PTPN12-201ENST00000248594 TLE6Q9H808 572 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 STK32BQ9NY57 414 aa19.24■□□□□ 0.67
PTPN12-201ENST00000248594 DCAF8L1A6NGE4 600 aa19.23■□□□□ 0.67
PTPN12-201ENST00000248594 UQCRBP14927 111 aa19.23■□□□□ 0.67
PTPN12-201ENST00000248594 MSX2P35548 267 aaPredicted RBP19.23■□□□□ 0.67
PTPN12-201ENST00000248594 CLUL1Q15846 466 aa19.23■□□□□ 0.67
PTPN12-201ENST00000248594 RALGPS1Q5JS13 557 aa19.23■□□□□ 0.67
PTPN12-201ENST00000248594 ZFP28Q8NHY6 868 aa19.23■□□□□ 0.67
PTPN12-201ENST00000248594 FAM84BQ96KN1 310 aaPredicted RBP19.23■□□□□ 0.67
PTPN12-201ENST00000248594 CSRNP1Q96S65 589 aa19.23■□□□□ 0.67
PTPN12-201ENST00000248594 SPATA7Q9P0W8 599 aa19.23■□□□□ 0.67
PTPN12-201ENST00000248594 AHDC1Q5TGY3 1603 aaPredicted RBP19.23■□□□□ 0.67
PTPN12-201ENST00000248594 IL6STP40189 918 aaPredicted RBP19.23■□□□□ 0.67
PTPN12-201ENST00000248594 EDRF1Q3B7T1 1238 aa19.23■□□□□ 0.67
PTPN12-201ENST00000248594 C6orf183Q5T699 404 aa19.23■□□□□ 0.67
PTPN12-201ENST00000248594 DPY19L2P1Q6NXN4 242 aa19.23■□□□□ 0.67
PTPN12-201ENST00000248594 DENND1AQ8TEH3 1009 aa19.23■□□□□ 0.67
PTPN12-201ENST00000248594 GIPC3Q8TF64 312 aa19.23■□□□□ 0.67
PTPN12-201ENST00000248594 FHDC1Q9C0D6 1143 aaPredicted RBP19.23■□□□□ 0.67
PTPN12-201ENST00000248594 FAM13AO94988 1023 aa19.23■□□□□ 0.67
PTPN12-201ENST00000248594 KRT10P13645 584 aa19.23■□□□□ 0.67
PTPN12-201ENST00000248594 NFKBIAP25963 317 aa19.23■□□□□ 0.67
PTPN12-201ENST00000248594 TMEM119Q4V9L6 283 aa19.23■□□□□ 0.67
PTPN12-201ENST00000248594 PRR16Q569H4 304 aa19.23■□□□□ 0.67
PTPN12-201ENST00000248594 PCDHB18PQ96TA0 734 aa19.23■□□□□ 0.67
PTPN12-201ENST00000248594 INIPQ9NRY2 104 aa19.23■□□□□ 0.67
PTPN12-201ENST00000248594 SELENONQ9NZV5 590 aa19.23■□□□□ 0.67
PTPN12-201ENST00000248594 DNM3Q9UQ16 869 aa19.23■□□□□ 0.67
PTPN12-201ENST00000248594 LPXNO60711 386 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 PDGFRBP09619 1106 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 TFDP1Q14186 410 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 SMAD1Q15797 465 aaKnown RBP19.22■□□□□ 0.67
PTPN12-201ENST00000248594 PPP6R3Q5H9R7 873 aaPredicted RBP19.22■□□□□ 0.67
PTPN12-201ENST00000248594 DHDDSQ86SQ9 333 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 SLF2Q8IX21 1173 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 DAGLBQ8NCG7 672 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 HAS1Q92839 578 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 CORO1BQ9BR76 489 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 SRP68Q9UHB9 627 aaKnown RBP19.22■□□□□ 0.67
PTPN12-201ENST00000248594 ADAMTS6Q9UKP5 1117 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 FRMD4BQ9Y2L6 1034 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 VILLO15195 856 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 RAG1P15918 1043 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 PSMC2P35998 433 aaKnown RBP19.22■□□□□ 0.67
PTPN12-201ENST00000248594 SH3BGRP55822 239 aaPredicted RBP19.22■□□□□ 0.67
PTPN12-201ENST00000248594 TMPRSS15P98073 1019 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 SIX1Q15475 284 aaPredicted RBP19.22■□□□□ 0.67
PTPN12-201ENST00000248594 SLC13A1Q9BZW2 595 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 PTTG2Q9NZH5 202 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 APEX2Q9UBZ4 518 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 LGALS13Q9UHV8 139 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 IKBKGQ9Y6K9 419 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 PRR5-ARHGAP8B1AHC4 643 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 HNRNPCL1O60812 293 aaKnown RBP19.22■□□□□ 0.67
PTPN12-201ENST00000248594 CIITAP33076 1130 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 HOXD13P35453 343 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 RXRGP48443 463 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 ARHGAP8P85298 464 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 ATP1A4Q13733 1029 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 HIC1Q14526 733 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 BBS9Q3SYG4 887 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 CTAGE3PQ8IX95 158 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 TUBB6Q9BUF5 446 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 RPL26L1Q9UNX3 145 aaKnown RBP19.22■□□□□ 0.67
PTPN12-201ENST00000248594 GMEB1Q9Y692 573 aa19.22■□□□□ 0.67
PTPN12-201ENST00000248594 SMIM31A0A1B0GVY4 71 aa19.21■□□□□ 0.67
PTPN12-201ENST00000248594 A8MXQ7 604 aa19.21■□□□□ 0.67
PTPN12-201ENST00000248594 UBAP1LF5GYI3 381 aa19.21■□□□□ 0.67
PTPN12-201ENST00000248594 NDUFB5O43674 189 aa19.21■□□□□ 0.67
PTPN12-201ENST00000248594 MT-ND3P03897 115 aa19.21■□□□□ 0.67
PTPN12-201ENST00000248594 KRT5P13647 590 aa19.21■□□□□ 0.67
PTPN12-201ENST00000248594 PDE1BQ01064 536 aa19.21■□□□□ 0.67
PTPN12-201ENST00000248594 MAP3K10Q02779 954 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms