RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 COPS5Q92905 334 aa23.21■■□□□ 1.31
RNF39-201ENST00000244360 YY1AP1Q9H869 796 aa23.21■■□□□ 1.31
RNF39-201ENST00000244360 FGFR4P22455 802 aa23.21■■□□□ 1.31
RNF39-201ENST00000244360 BRD2P25440 801 aaKnown RBP23.21■■□□□ 1.31
RNF39-201ENST00000244360 MBTD1Q05BQ5 628 aa23.21■■□□□ 1.31
RNF39-201ENST00000244360 TRPC3Q13507 836 aa23.21■■□□□ 1.31
RNF39-201ENST00000244360 MFSD5Q6N075 450 aa23.21■■□□□ 1.31
RNF39-201ENST00000244360 CCDC197Q8NCU1 140 aa23.21■■□□□ 1.31
RNF39-201ENST00000244360 SHCBP1Q8NEM2 672 aa23.21■■□□□ 1.31
RNF39-201ENST00000244360 ATXN2LQ8WWM7 1075 aaKnown RBP23.21■■□□□ 1.31
RNF39-201ENST00000244360 FAM212AQ96EL1 285 aa23.21■■□□□ 1.31
RNF39-201ENST00000244360 ZNF317Q96PQ6 595 aaPredicted RBP23.21■■□□□ 1.31
RNF39-201ENST00000244360 NFKBIZQ9BYH8 718 aa23.21■■□□□ 1.31
RNF39-201ENST00000244360 RNF181Q9P0P0 153 aa23.21■■□□□ 1.31
RNF39-201ENST00000244360 ASIC3Q9UHC3 531 aa23.21■■□□□ 1.31
RNF39-201ENST00000244360 GJB6O95452 261 aa23.2■■□□□ 1.3
RNF39-201ENST00000244360 TXNP10599 105 aaKnown RBP23.2■■□□□ 1.3
RNF39-201ENST00000244360 CD58P19256 250 aa23.2■■□□□ 1.3
RNF39-201ENST00000244360 ITIH4Q14624 930 aa23.2■■□□□ 1.3
RNF39-201ENST00000244360 ZNF699Q32M78 642 aa23.2■■□□□ 1.3
RNF39-201ENST00000244360 TNFAIP8L3Q5GJ75 292 aa23.2■■□□□ 1.3
RNF39-201ENST00000244360 LRRC38Q5VT99 294 aa23.2■■□□□ 1.3
RNF39-201ENST00000244360 CCDC50Q8IVM0 306 aa23.2■■□□□ 1.3
RNF39-201ENST00000244360 TMEM35BQ8NCS4 154 aa23.2■■□□□ 1.3
RNF39-201ENST00000244360 MDM1Q8TC05 714 aa23.2■■□□□ 1.3
RNF39-201ENST00000244360 OPTNQ96CV9 577 aa23.2■■□□□ 1.3
RNF39-201ENST00000244360 KLC4Q9NSK0 619 aa23.2■■□□□ 1.3
RNF39-201ENST00000244360 TNFSF13BQ9Y275 285 aa23.2■■□□□ 1.3
RNF39-201ENST00000244360 TLDC2A0PJX2 215 aa23.2■■□□□ 1.3
RNF39-201ENST00000244360 B4GALT5O43286 388 aa23.2■■□□□ 1.3
RNF39-201ENST00000244360 RPL7AP62424 266 aaKnown RBP23.2■■□□□ 1.3
RNF39-201ENST00000244360 TFAMQ00059 246 aaKnown RBP23.2■■□□□ 1.3
RNF39-201ENST00000244360 CAV1Q03135 178 aa23.2■■□□□ 1.3
RNF39-201ENST00000244360 ZNF252P-AS1Q0IIN9 211 aa23.2■■□□□ 1.3
RNF39-201ENST00000244360 PPP1R15BQ5SWA1 713 aa23.2■■□□□ 1.3
RNF39-201ENST00000244360 EEF1DP3Q658K8 133 aa23.2■■□□□ 1.3
RNF39-201ENST00000244360 NLRP4Q96MN2 994 aa23.2■■□□□ 1.3
RNF39-201ENST00000244360 MCM3APO60318 1980 aa23.19■■□□□ 1.3
RNF39-201ENST00000244360 RASGRF2O14827 1237 aa23.19■■□□□ 1.3
RNF39-201ENST00000244360 C22orf31O95567 290 aa23.19■■□□□ 1.3
RNF39-201ENST00000244360 TNNC2P02585 160 aa23.19■■□□□ 1.3
RNF39-201ENST00000244360 GJB1P08034 283 aa23.19■■□□□ 1.3
RNF39-201ENST00000244360 EIF4BP23588 611 aaKnown RBP23.19■■□□□ 1.3
RNF39-201ENST00000244360 TTLL4Q14679 1199 aa23.19■■□□□ 1.3
RNF39-201ENST00000244360 EFCAB12Q6NXP0 572 aa23.19■■□□□ 1.3
RNF39-201ENST00000244360 ANKS1BQ7Z6G8 1248 aa23.19■■□□□ 1.3
RNF39-201ENST00000244360 CCT6BQ92526 530 aa23.19■■□□□ 1.3
RNF39-201ENST00000244360 HEMGNQ9BXL5 484 aa23.19■■□□□ 1.3
RNF39-201ENST00000244360 NSRP1Q9H0G5 558 aaKnown RBP23.19■■□□□ 1.3
RNF39-201ENST00000244360 CDT1Q9H211 546 aa23.19■■□□□ 1.3
RNF39-201ENST00000244360 ADAM7Q9H2U9 754 aa23.19■■□□□ 1.3
RNF39-201ENST00000244360 SLC40A1Q9NP59 571 aa23.19■■□□□ 1.3
RNF39-201ENST00000244360 INTS9Q9NV88 658 aaKnown RBP23.19■■□□□ 1.3
RNF39-201ENST00000244360 ANK1P16157 1881 aa23.19■■□□□ 1.3
RNF39-201ENST00000244360 INO80B-WBP1J3KQ70 363 aa23.18■■□□□ 1.3
RNF39-201ENST00000244360 IL18RAPO95256 599 aa23.18■■□□□ 1.3
RNF39-201ENST00000244360 CLCN3P51790 818 aa23.18■■□□□ 1.3
RNF39-201ENST00000244360 TAP1Q03518 808 aa23.18■■□□□ 1.3
RNF39-201ENST00000244360 TMEM63BQ5T3F8 832 aa23.18■■□□□ 1.3
RNF39-201ENST00000244360 THNSL1Q8IYQ7 743 aa23.18■■□□□ 1.3
RNF39-201ENST00000244360 WDTC1Q8N5D0 677 aa23.18■■□□□ 1.3
RNF39-201ENST00000244360 TFAP2BQ92481 460 aa23.18■■□□□ 1.3
RNF39-201ENST00000244360 ANKRD36BP1Q96IX9 119 aa23.18■■□□□ 1.3
RNF39-201ENST00000244360 INO80BQ9C086 356 aaPredicted RBP23.18■■□□□ 1.3
RNF39-201ENST00000244360 USTQ9Y2C2 406 aa23.18■■□□□ 1.3
RNF39-201ENST00000244360 ASB14A6NK59 587 aa23.18■■□□□ 1.3
RNF39-201ENST00000244360 YWHAEP62258 255 aaKnown RBP23.18■■□□□ 1.3
RNF39-201ENST00000244360 POU5F1BQ06416 359 aa23.18■■□□□ 1.3
RNF39-201ENST00000244360 DNAJC24Q6P3W2 148 aa23.18■■□□□ 1.3
RNF39-201ENST00000244360 RCOR2Q8IZ40 523 aa23.18■■□□□ 1.3
RNF39-201ENST00000244360 FAXDC2Q96IV6 333 aa23.18■■□□□ 1.3
RNF39-201ENST00000244360 MINDY3Q9H8M7 445 aa23.18■■□□□ 1.3
RNF39-201ENST00000244360 PDGFCQ9NRA1 345 aa23.18■■□□□ 1.3
RNF39-201ENST00000244360 CHUKO15111 745 aa23.17■■□□□ 1.3
RNF39-201ENST00000244360 DNAJC8O75937 253 aaPredicted RBP23.17■■□□□ 1.3
RNF39-201ENST00000244360 WEE2P0C1S8 567 aa23.17■■□□□ 1.3
RNF39-201ENST00000244360 ATF2P15336 505 aa23.17■■□□□ 1.3
RNF39-201ENST00000244360 ATP5DP30049 168 aa23.17■■□□□ 1.3
RNF39-201ENST00000244360 SCTRP47872 440 aa23.17■■□□□ 1.3
RNF39-201ENST00000244360 NFX1Q12986 1120 aaKnown RBP23.17■■□□□ 1.3
RNF39-201ENST00000244360 FAM187BQ17R55 369 aa23.17■■□□□ 1.3
RNF39-201ENST00000244360 CCDC91Q7Z6B0 441 aa23.17■■□□□ 1.3
RNF39-201ENST00000244360 CEP120Q8N960 986 aa23.17■■□□□ 1.3
RNF39-201ENST00000244360 IPO4Q8TEX9 1081 aaKnown RBP23.17■■□□□ 1.3
RNF39-201ENST00000244360 FBXO41Q8TF61 875 aa23.17■■□□□ 1.3
RNF39-201ENST00000244360 RBM41Q96IZ5 413 aaKnown RBP23.17■■□□□ 1.3
RNF39-201ENST00000244360 TRAIPQ9BWF2 469 aa23.17■■□□□ 1.3
RNF39-201ENST00000244360 CDC42EP4Q9H3Q1 356 aaKnown RBP23.17■■□□□ 1.3
RNF39-201ENST00000244360 ERAP1Q9NZ08 941 aa23.17■■□□□ 1.3
RNF39-201ENST00000244360 ARHGAP1Q07960 439 aa23.17■■□□□ 1.3
RNF39-201ENST00000244360 TTLL12Q14166 644 aaPredicted RBP23.17■■□□□ 1.3
RNF39-201ENST00000244360 NIPA2Q8N8Q9 360 aa23.17■■□□□ 1.3
RNF39-201ENST00000244360 ZC3H15Q8WU90 426 aaKnown RBP23.17■■□□□ 1.3
RNF39-201ENST00000244360 SAMD15Q9P1V8 674 aa23.17■■□□□ 1.3
RNF39-201ENST00000244360 ZSWIM8A7E2V4 1837 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 DNM1LO00429 736 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 PTPN7P35236 360 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 CETN2P41208 172 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 ITGA8P53708 1063 aa23.16■■□□□ 1.3
RNF39-201ENST00000244360 PPARDQ03181 441 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms