RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 HAS3O00219 553 aa19.62■□□□□ 0.73
HOXC11-201ENST00000243082 NPTXRO95502 500 aa19.62■□□□□ 0.73
HOXC11-201ENST00000243082 CYP2C9P11712 490 aa19.62■□□□□ 0.73
HOXC11-201ENST00000243082 TAS2R40P59535 323 aa19.62■□□□□ 0.73
HOXC11-201ENST00000243082 DCAF4L1Q3SXM0 396 aa19.62■□□□□ 0.73
HOXC11-201ENST00000243082 CCDC137Q6PK04 289 aaKnown RBP19.62■□□□□ 0.73
HOXC11-201ENST00000243082 C12orf50Q8NA57 414 aaPredicted RBP19.62■□□□□ 0.73
HOXC11-201ENST00000243082 SLC4A11Q8NBS3 891 aa19.62■□□□□ 0.73
HOXC11-201ENST00000243082 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.62■□□□□ 0.73
HOXC11-201ENST00000243082 HPDLQ96IR7 371 aa19.62■□□□□ 0.73
HOXC11-201ENST00000243082 TRIM31Q9BZY9 425 aa19.62■□□□□ 0.73
HOXC11-201ENST00000243082 LHX5Q9H2C1 402 aa19.62■□□□□ 0.73
HOXC11-201ENST00000243082 DPP3Q9NY33 737 aa19.62■□□□□ 0.73
HOXC11-201ENST00000243082 HMGXB4Q9UGU5 601 aa19.62■□□□□ 0.73
HOXC11-201ENST00000243082 ITGA11Q9UKX5 1188 aa19.62■□□□□ 0.73
HOXC11-201ENST00000243082 CILPO75339 1184 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 CD19P15391 556 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 MAN1A1P33908 653 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 FLT3P36888 993 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 COILP38432 576 aaPredicted RBP19.61■□□□□ 0.73
HOXC11-201ENST00000243082 PSEN2P49810 448 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 LLGL1Q15334 1064 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 ERICH1Q86X53 443 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 NT5DC4Q86YG4 428 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 CD302Q8IX05 232 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 OSMRQ99650 979 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 ELOVL4Q9GZR5 314 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 CXCL16Q9H2A7 254 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 CYP3A43Q9HB55 503 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.61■□□□□ 0.73
HOXC11-201ENST00000243082 PSTPIP1O43586 416 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 RGS2P41220 211 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 ORC1Q13415 861 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 PPP1R15BQ5SWA1 713 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 CFAP58Q5T655 872 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 CATSPER4Q7RTX7 472 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 RHOT1Q8IXI2 618 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 EXOC4Q96A65 974 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 KIF12Q96FN5 646 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 HERPUD2Q9BSE4 406 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 LRRC19Q9H756 370 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 IP6K2Q9UHH9 426 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 CYTH4Q9UIA0 394 aa19.61■□□□□ 0.73
HOXC11-201ENST00000243082 MED7O43513 233 aa19.6■□□□□ 0.73
HOXC11-201ENST00000243082 STAU1O95793 577 aaKnown RBP19.6■□□□□ 0.73
HOXC11-201ENST00000243082 SLC10A3P09131 477 aa19.6■□□□□ 0.73
HOXC11-201ENST00000243082 DARSP14868 501 aaKnown RBP19.6■□□□□ 0.73
HOXC11-201ENST00000243082 DRG2P55039 364 aaKnown RBP19.6■□□□□ 0.73
HOXC11-201ENST00000243082 RBP5P82980 135 aa19.6■□□□□ 0.73
HOXC11-201ENST00000243082 BEX3Q00994 111 aa19.6■□□□□ 0.73
HOXC11-201ENST00000243082 ZNF252P-AS1Q0IIN9 211 aa19.6■□□□□ 0.73
HOXC11-201ENST00000243082 DNAJC24Q6P3W2 148 aa19.6■□□□□ 0.73
HOXC11-201ENST00000243082 SLC27A1Q6PCB7 646 aa19.6■□□□□ 0.73
HOXC11-201ENST00000243082 EIF2AQ9BY44 585 aaKnown RBP19.6■□□□□ 0.73
HOXC11-201ENST00000243082 SNTG2Q9NY99 539 aa19.6■□□□□ 0.73
HOXC11-201ENST00000243082 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.6■□□□□ 0.73
HOXC11-201ENST00000243082 CEP83Q9Y592 693 aa19.6■□□□□ 0.73
HOXC11-201ENST00000243082 CPT1AP50416 773 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 PTPN11Q06124 597 aaPredicted RBP19.59■□□□□ 0.73
HOXC11-201ENST00000243082 KATNAL2Q8IYT4 538 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 DNAJB3Q8WWF6 145 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 TMEM176AQ96HP8 235 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 MCEEQ96PE7 176 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 APBA2Q99767 749 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 FAM204AQ9H8W3 233 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 PLEKHA5Q9HAU0 1116 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 ZDHHC18Q9NUE0 388 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 RASAL2Q9UJF2 1139 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 USTQ9Y2C2 406 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 Q9Y3F1 56 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 CITO14578 2027 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 TREHO43280 583 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 OPA1O60313 960 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 MYL3P08590 195 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 P4HA1P13674 534 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 FNTAP49354 379 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 INHBEP58166 350 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 ZNF200P98182 395 aaPredicted RBP19.59■□□□□ 0.73
HOXC11-201ENST00000243082 OGDHQ02218 1023 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 PTPN20Q4JDL3 420 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 CYP4A22Q5TCH4 519 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 ZMAT2Q96NC0 199 aaKnown RBP19.59■□□□□ 0.73
HOXC11-201ENST00000243082 RUNDC3BQ96NL0 473 aa19.59■□□□□ 0.73
HOXC11-201ENST00000243082 PODXLO00592 558 aa19.58■□□□□ 0.73
HOXC11-201ENST00000243082 HSD17B3P37058 310 aa19.58■□□□□ 0.73
HOXC11-201ENST00000243082 KCNJ1P48048 391 aa19.58■□□□□ 0.73
HOXC11-201ENST00000243082 PCBP1Q15365 356 aaKnown RBP eCLIP19.58■□□□□ 0.73
HOXC11-201ENST00000243082 UAP1Q16222 522 aaPredicted RBP19.58■□□□□ 0.73
HOXC11-201ENST00000243082 NOTUMQ6P988 496 aa19.58■□□□□ 0.73
HOXC11-201ENST00000243082 C3orf20Q8ND61 904 aa19.58■□□□□ 0.73
HOXC11-201ENST00000243082 SOCS4Q8WXH5 440 aa19.58■□□□□ 0.73
HOXC11-201ENST00000243082 LRRC45Q96CN5 670 aa19.58■□□□□ 0.73
HOXC11-201ENST00000243082 SNX27Q96L92 541 aa19.58■□□□□ 0.73
HOXC11-201ENST00000243082 RUFY1Q96T51 708 aa19.58■□□□□ 0.73
HOXC11-201ENST00000243082 AP5M1Q9H0R1 490 aa19.58■□□□□ 0.73
HOXC11-201ENST00000243082 PSD3Q9NYI0 1048 aa19.58■□□□□ 0.73
HOXC11-201ENST00000243082 TJP2Q9UDY2 1190 aa19.58■□□□□ 0.73
HOXC11-201ENST00000243082 DERAQ9Y315 318 aa19.58■□□□□ 0.73
HOXC11-201ENST00000243082 SNX24Q9Y343 169 aa19.58■□□□□ 0.73
HOXC11-201ENST00000243082 CTGFP29279 349 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms