RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 ABHD14A-ACY1A0A1B0GW23 586 aa3.9□□□□□ -1.79
UFM1-201ENST00000239878 CUTAO60888 179 aa3.9□□□□□ -1.79
UFM1-201ENST00000239878 MMP3P08254 477 aa3.9□□□□□ -1.79
UFM1-201ENST00000239878 GLULP15104 373 aa3.9□□□□□ -1.79
UFM1-201ENST00000239878 TRIM21P19474 475 aaKnown RBP3.9□□□□□ -1.79
UFM1-201ENST00000239878 NFKBIAP25963 317 aa3.9□□□□□ -1.79
UFM1-201ENST00000239878 KCNJ6P48051 423 aa3.9□□□□□ -1.79
UFM1-201ENST00000239878 NAPAP54920 295 aa3.9□□□□□ -1.79
UFM1-201ENST00000239878 PTPAQ15257 358 aa3.9□□□□□ -1.79
UFM1-201ENST00000239878 EMC10Q5UCC4 262 aa3.9□□□□□ -1.79
UFM1-201ENST00000239878 DUS1LQ6P1R4 473 aaKnown RBP3.9□□□□□ -1.79
UFM1-201ENST00000239878 C6orf89Q6UWU4 347 aa3.9□□□□□ -1.79
UFM1-201ENST00000239878 RBM43Q6ZSC3 357 aaKnown RBP3.9□□□□□ -1.79
UFM1-201ENST00000239878 KRT25Q7Z3Z0 450 aa3.9□□□□□ -1.79
UFM1-201ENST00000239878 SRGAP1Q7Z6B7 1085 aa3.9□□□□□ -1.79
UFM1-201ENST00000239878 PASD1Q8IV76 773 aa3.9□□□□□ -1.79
UFM1-201ENST00000239878 DHX40Q8IX18 779 aaKnown RBP3.9□□□□□ -1.79
UFM1-201ENST00000239878 REXO1Q8N1G1 1221 aaKnown RBP3.9□□□□□ -1.79
UFM1-201ENST00000239878 ANKRD35Q8N283 1001 aa3.9□□□□□ -1.79
UFM1-201ENST00000239878 ARHGAP18Q8N392 663 aa3.9□□□□□ -1.79
UFM1-201ENST00000239878 NR1H4Q96RI1 486 aaPredicted RBP3.9□□□□□ -1.79
UFM1-201ENST00000239878 GPR20Q99678 358 aa3.9□□□□□ -1.79
UFM1-201ENST00000239878 SMAD5Q99717 465 aaKnown RBP3.9□□□□□ -1.79
UFM1-201ENST00000239878 ANLNQ9NQW6 1124 aa3.9□□□□□ -1.79
UFM1-201ENST00000239878 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.9□□□□□ -1.79
UFM1-201ENST00000239878 ZNHIT6Q9NWK9 470 aaKnown RBP3.9□□□□□ -1.79
UFM1-201ENST00000239878 SCHIP1Q9P0W5 487 aaPredicted RBP3.9□□□□□ -1.79
UFM1-201ENST00000239878 PAIP2BQ9ULR5 123 aaKnown RBP3.9□□□□□ -1.79
UFM1-201ENST00000239878 A0A1B0GVC2 190 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 GSTTP1A0A1W2PQM5 241 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 MBLAC1A4D2B0 266 aaPredicted RBP3.89□□□□□ -1.79
UFM1-201ENST00000239878 MSH4O15457 936 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 PFDN1O60925 122 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 ATP9AO75110 1047 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 CSPG5O95196 566 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 LYPLA2O95372 231 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 NPTXRO95502 500 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 PENKP01210 267 aaPredicted RBP3.89□□□□□ -1.79
UFM1-201ENST00000239878 SPATA31D3P0C874 917 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 CYP2B6P20813 491 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 SFPQP23246 707 aaKnown RBP eCLIP3.89□□□□□ -1.79
UFM1-201ENST00000239878 GJB2P29033 226 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 GNA11P29992 359 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 HOXC13P31276 330 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 MLH1P40692 756 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 ADCYAP1R1P41586 468 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 TUFMP49411 452 aaKnown RBP3.89□□□□□ -1.79
UFM1-201ENST00000239878 GSTM4Q03013 218 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 STK3Q13188 491 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 DYNC1I2Q13409 638 aaKnown RBP3.89□□□□□ -1.79
UFM1-201ENST00000239878 ITGA7Q13683 1181 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 PLS1Q14651 629 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 GRM3Q14832 879 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 STXBP2Q15833 593 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 SLC9C1Q4G0N8 1177 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 CEP55Q53EZ4 464 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 ANKRD20A8PQ5CZ79 823 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 TBCELQ5QJ74 424 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 KLHL10Q6JEL2 608 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 SLC2A7Q6PXP3 512 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 METTL7BQ6UX53 244 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 ABHD15Q6UXT9 468 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 SPATA31D4Q6ZUB0 917 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 EPM2AIP1Q7L775 607 aaPredicted RBP3.89□□□□□ -1.79
UFM1-201ENST00000239878 OTOP3Q7RTS5 596 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 NOSTRINQ8IVI9 506 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 RBBP8NLQ8NC74 664 aaPredicted RBP3.89□□□□□ -1.79
UFM1-201ENST00000239878 CYP2W1Q8TAV3 490 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 RAET1EQ8TD07 263 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 AGAP11Q8TF27 550 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 ZNF473Q8WTR7 871 aaKnown RBP3.89□□□□□ -1.79
UFM1-201ENST00000239878 U2AF1L4Q8WU68 220 aaKnown RBP3.89□□□□□ -1.79
UFM1-201ENST00000239878 SCFD2Q8WU76 684 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 BHMTQ93088 406 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 LENG1Q96BZ8 264 aaPredicted RBP3.89□□□□□ -1.79
UFM1-201ENST00000239878 TBC1D20Q96BZ9 403 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 RIT2Q99578 217 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 WDR11Q9BZH6 1224 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 BCAS3Q9H6U6 928 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 C6orf50Q9HD87 102 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 FBXO2Q9UK22 296 aaPredicted RBP3.89□□□□□ -1.79
UFM1-201ENST00000239878 FAM184BQ9ULE4 1060 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 KCNJ14Q9UNX9 436 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 TLR6Q9Y2C9 796 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 HEY1Q9Y5J3 304 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 GMEB1Q9Y692 573 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 FAM237AA0A1B0GTK4 181 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 LRRD1A4D1F6 860 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 VPS37CA5D8V6 355 aaPredicted RBP3.89□□□□□ -1.79
UFM1-201ENST00000239878 HNRNPRO43390 633 aaKnown RBP3.89□□□□□ -1.79
UFM1-201ENST00000239878 STX6O43752 255 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 ATP2C2O75185 946 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 AGR2O95994 175 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 ARP10275 920 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 ENDOUP21128 410 aaKnown RBP3.89□□□□□ -1.79
UFM1-201ENST00000239878 KRT2P35908 639 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 GDF10P55107 478 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 PTPN11Q06124 597 aaPredicted RBP3.89□□□□□ -1.79
UFM1-201ENST00000239878 IFFO1Q0D2I5 559 aa3.89□□□□□ -1.79
UFM1-201ENST00000239878 NR5A1Q13285 461 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms