RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 USTQ9Y2C2 406 aa9.25□□□□□ -0.93
VPS4B-201ENST00000238497 GRID2IPA4D2P6 1211 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 HOXA2O43364 376 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 SPOPO43791 374 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 ADRB2P07550 413 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 FERP16591 822 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 CD58P19256 250 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 CARSP49589 748 aaKnown RBP9.24□□□□□ -0.93
VPS4B-201ENST00000238497 TUBB2AQ13885 445 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 NAB2Q15742 525 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 COBLL1Q53SF7 1204 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 CMTR2Q8IYT2 770 aaKnown RBP9.24□□□□□ -0.93
VPS4B-201ENST00000238497 TAS1R2Q8TE23 839 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 IQCDQ96DY2 449 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 FAM193BQ96PV7 902 aaPredicted RBP9.24□□□□□ -0.93
VPS4B-201ENST00000238497 TUBB2BQ9BVA1 445 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 SELENOOQ9BVL4 669 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 ACBD3Q9H3P7 528 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 DHX33Q9H6R0 707 aaKnown RBP9.24□□□□□ -0.93
VPS4B-201ENST00000238497 ENTPD7Q9NQZ7 604 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 RNF19AQ9NV58 838 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 SEL1LQ9UBV2 794 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 PCDHGC5Q9Y5F6 944 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 TCF20Q9UGU0 1960 aaKnown RBP9.24□□□□□ -0.93
VPS4B-201ENST00000238497 PER2O15055 1255 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 RB1P06400 928 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 TMC7Q7Z402 723 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 SLC47A2Q86VL8 602 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 ADAMTS19Q8TE59 1207 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 ATXN2LQ8WWM7 1075 aaKnown RBP9.24□□□□□ -0.93
VPS4B-201ENST00000238497 ASB2Q96Q27 587 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 UHRF1Q96T88 793 aaPredicted RBP9.24□□□□□ -0.93
VPS4B-201ENST00000238497 FAM107BQ9H098 131 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 TMEM117Q9H0C3 514 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 UBE2ZQ9H832 354 aaPredicted RBP9.24□□□□□ -0.93
VPS4B-201ENST00000238497 MINDY3Q9H8M7 445 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 ANKEF1Q9NU02 776 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 TBX20Q9UMR3 447 aa9.24□□□□□ -0.93
VPS4B-201ENST00000238497 ZMYM2Q9UBW7 1377 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 ANKRD65E5RJM6 399 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 F8VZ95 297 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 BUB1BO60566 1050 aaPredicted RBP9.23□□□□□ -0.93
VPS4B-201ENST00000238497 FGGP02679 453 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 ITGB1P05556 798 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 KRT19P08727 400 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 ITGA4P13612 1032 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 ALDH7A1P49419 539 aaKnown RBP9.23□□□□□ -0.93
VPS4B-201ENST00000238497 VPS41P49754 854 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 NDUFV1P49821 464 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 MXD4Q14582 209 aaPredicted RBP9.23□□□□□ -0.93
VPS4B-201ENST00000238497 PLPP4Q5VZY2 271 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 LLGL2Q6P1M3 1020 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 SCARA5Q6ZMJ2 495 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 INTS8Q75QN2 995 aaKnown RBP9.23□□□□□ -0.93
VPS4B-201ENST00000238497 LINC01465Q8N7H1 131 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 ASAP3Q8TDY4 903 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 ARHGEF26Q96DR7 871 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 NSUN3Q9H649 340 aaKnown RBP9.23□□□□□ -0.93
VPS4B-201ENST00000238497 XPNPEP1Q9NQW7 623 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 FAM105AQ9NUU6 356 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 AMACRQ9UHK6 382 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 AMFRQ9UKV5 643 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 L1RE1Q9UN81 338 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 EXOC7Q9UPT5 735 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 IGKV6-21A0A0C4DH24 114 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 ANO9A1A5B4 782 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 MEIS3P2A8K0S8 358 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 EIF3DO15371 548 aaKnown RBP eCLIP9.23□□□□□ -0.93
VPS4B-201ENST00000238497 GUCY2CP25092 1073 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 HNRNPH3P31942 346 aaKnown RBP9.23□□□□□ -0.93
VPS4B-201ENST00000238497 IRS1P35568 1242 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 GGCXP38435 758 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 ATP1A2P50993 1020 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 DAB2IPQ5VWQ8 1189 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 ZBTB8OSQ8IWT0 167 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 TMEM169Q96HH4 297 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 ZNF558Q96NG5 402 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 STK33Q9BYT3 514 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 AIPL1Q9NZN9 384 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 PARP2Q9UGN5 583 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 ADAM21Q9UKJ8 722 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 COG5Q9UP83 839 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 HES2Q9Y543 173 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 PCDHB2Q9Y5E7 798 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 A0A0U1RQF3 1178 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 GOLGA6BA6NDN3 693 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 ASAP2O43150 1006 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 FGF18O76093 207 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 POMCP01189 267 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 GLI1P08151 1106 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 CDK17Q00537 523 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 KRT17Q04695 432 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 CCDC25Q86WR0 208 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 CPNE8Q86YQ8 564 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 LRRC43Q8N309 656 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 GOLGA5Q8TBA6 731 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 LNX1Q8TBB1 728 aaPredicted RBP9.23□□□□□ -0.93
VPS4B-201ENST00000238497 PLEKHO2Q8TD55 490 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 CPA5Q8WXQ8 436 aa9.23□□□□□ -0.93
VPS4B-201ENST00000238497 ZNF689Q96CS4 500 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms