RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 CCDC150Q8NCX0 1101 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 LNX1Q8TBB1 728 aaPredicted RBP12.14□□□□□ -0.47
SF3B6-201ENST00000233468 SPATA18Q8TC71 538 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 PARD3BQ8TEW8 1205 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 NELFBQ8WX92 580 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 PBXIP1Q96AQ6 731 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 SENP8Q96LD8 212 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 CEP63Q96MT8 703 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 S1PR5Q9H228 398 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 PLEKHA4Q9H4M7 779 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 METTL14Q9HCE5 456 aaKnown RBP12.14□□□□□ -0.47
SF3B6-201ENST00000233468 MTRRQ9UBK8 725 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 MAFFQ9ULX9 164 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 HCFC2Q9Y5Z7 792 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 MYH11P35749 1972 aa12.14□□□□□ -0.47
SF3B6-201ENST00000233468 OR6C75A6NL08 312 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 PPP1R3GB7ZBB8 358 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 I3L4J1 428 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 CYB561D2O14569 222 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 AKAP3O75969 853 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 OAZ2O95190 189 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 P4HA1P13674 534 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 ATICP31939 592 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 GTF2H1P32780 548 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 CLCN4P51793 760 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 CLDN10P78369 228 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 BIRC3Q13489 604 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 KCNC3Q14003 757 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 CTXN3Q4LDR2 81 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 ANKRD40Q6AI12 368 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 CES5AQ6NT32 575 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 LLGL2Q6P1M3 1020 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 SYCE2Q6PIF2 218 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 DPH6Q7L8W6 267 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 FILIP1Q7Z7B0 1213 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 TMEM86AQ8N2M4 240 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 SUSD6Q92537 303 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 B3GALT6Q96L58 329 aa12.13□□□□□ -0.47
SF3B6-201ENST00000233468 PHF7Q9BWX1 381 aaPredicted RBP12.13□□□□□ -0.47
SF3B6-201ENST00000233468 TCHHQ07283 1943 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 WDR87Q6ZQQ6 2873 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 LRRIQ3A6PVS8 624 aaPredicted RBP12.12□□□□□ -0.47
SF3B6-201ENST00000233468 DPYSL4O14531 572 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 CLSTN1O94985 981 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 CYP11A1P05108 521 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 FAM163BP0C2L3 166 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 ELF1P32519 619 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 CASP4P49662 377 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 WNT7BP56706 349 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 ITIH3Q06033 890 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 BFSP1Q12934 665 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 RAB33AQ14088 237 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 MRPL58Q14197 206 aaKnown RBP12.12□□□□□ -0.47
SF3B6-201ENST00000233468 CCDC183Q5T5S1 534 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 LIN9Q5TKA1 542 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 TPGS2Q68CL5 300 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 LMBRD2Q68DH5 695 aaPredicted RBP12.12□□□□□ -0.47
SF3B6-201ENST00000233468 OVOS1Q6IE37 1185 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 SLC8B1Q6J4K2 584 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 ANKRD54Q6NXT1 300 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 SASS6Q6UVJ0 657 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 PRSS55Q6UWB4 352 aaPredicted RBP12.12□□□□□ -0.47
SF3B6-201ENST00000233468 CYP26C1Q6V0L0 522 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 BMP8AQ7Z5Y6 402 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 TOP6BLQ8N6T0 577 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 OR5B17Q8NGF7 314 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 GPT2Q8TD30 523 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 SLC22A17Q8WUG5 538 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 HPDLQ96IR7 371 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 IMPG2Q9BZV3 1241 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 KCNH6Q9H252 994 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 SFXN1Q9H9B4 322 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 GDAP2Q9NXN4 497 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 ARMCX3Q9UH62 379 aaPredicted RBP12.12□□□□□ -0.47
SF3B6-201ENST00000233468 RWDD2AQ9UIY3 292 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 CTNND2Q9UQB3 1225 aa12.12□□□□□ -0.47
SF3B6-201ENST00000233468 STAU1O95793 577 aaKnown RBP12.11□□□□□ -0.47
SF3B6-201ENST00000233468 CCDC192P0DO97 292 aa12.11□□□□□ -0.47
SF3B6-201ENST00000233468 TRIM21P19474 475 aaKnown RBP12.11□□□□□ -0.47
SF3B6-201ENST00000233468 ERCC5P28715 1186 aaPredicted RBP12.11□□□□□ -0.47
SF3B6-201ENST00000233468 OR1D2P34982 312 aa12.11□□□□□ -0.47
SF3B6-201ENST00000233468 LHX1P48742 406 aa12.11□□□□□ -0.47
SF3B6-201ENST00000233468 VCPP55072 806 aaKnown RBP12.11□□□□□ -0.47
SF3B6-201ENST00000233468 NLRP12P59046 1061 aa12.11□□□□□ -0.47
SF3B6-201ENST00000233468 TNNC1P63316 161 aa12.11□□□□□ -0.47
SF3B6-201ENST00000233468 MYL7Q01449 175 aa12.11□□□□□ -0.47
SF3B6-201ENST00000233468 CETN1Q12798 172 aa12.11□□□□□ -0.47
SF3B6-201ENST00000233468 SMARCB1Q12824 385 aa12.11□□□□□ -0.47
SF3B6-201ENST00000233468 TPD52L1Q16890 204 aaPredicted RBP12.11□□□□□ -0.47
SF3B6-201ENST00000233468 SGSM1Q2NKQ1 1148 aa12.11□□□□□ -0.47
SF3B6-201ENST00000233468 UVSSAQ2YD98 709 aa12.11□□□□□ -0.47
SF3B6-201ENST00000233468 CCDC40Q4G0X9 1142 aa12.11□□□□□ -0.47
SF3B6-201ENST00000233468 CCDC149Q6ZUS6 474 aa12.11□□□□□ -0.47
SF3B6-201ENST00000233468 FRMD5Q7Z6J6 570 aa12.11□□□□□ -0.47
SF3B6-201ENST00000233468 PALB2Q86YC2 1186 aa12.11□□□□□ -0.47
SF3B6-201ENST00000233468 ZC3H3Q8IXZ2 948 aaKnown RBP12.11□□□□□ -0.47
SF3B6-201ENST00000233468 ZNF454Q8N9F8 522 aa12.11□□□□□ -0.47
SF3B6-201ENST00000233468 FEZF2Q8TBJ5 459 aa12.11□□□□□ -0.47
SF3B6-201ENST00000233468 TAF4BQ92750 862 aa12.11□□□□□ -0.47
SF3B6-201ENST00000233468 ASIC4Q96FT7 647 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms