RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 SOX11P35716 441 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 MAGEA4P43358 317 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 TWF1Q12792 350 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 HORMAD1Q86X24 394 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 JAMLQ86YT9 394 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 IPMKQ8NFU5 416 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 UBA3Q8TBC4 463 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 THTPAQ9BU02 230 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 CELF4Q9BZC1 486 aaKnown RBP12.07□□□□□ -0.48
LAMA4-201ENST00000230538 METTL5Q9NRN9 209 aaKnown RBP12.07□□□□□ -0.48
LAMA4-201ENST00000230538 PSD3Q9NYI0 1048 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 MTO1Q9Y2Z2 717 aaKnown RBP12.07□□□□□ -0.48
LAMA4-201ENST00000230538 UNC13BO14795 1591 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 SPAG6O75602 509 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 OSBPL8Q9BZF1 889 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 FAM129AQ9BZQ8 928 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 RSAD1Q9HA92 442 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 SH3BP1Q9Y3L3 701 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 ZNF711Q9Y462 761 aa12.07□□□□□ -0.48
LAMA4-201ENST00000230538 EXTL3O43909 919 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 RPS6KA5O75582 802 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 CCDC159P0C7I6 412 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 MRPS15P82914 257 aaKnown RBP12.06□□□□□ -0.48
LAMA4-201ENST00000230538 SMTNL2Q2TAL5 461 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 IFNEQ86WN2 208 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 HNRNPRO43390 633 aaKnown RBP12.06□□□□□ -0.48
LAMA4-201ENST00000230538 UPP2O95045 317 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 S100A5P33763 92 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 RGS4P49798 205 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 MGAT5BQ3V5L5 792 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 DCAF6Q58WW2 860 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 GJB7Q6PEY0 223 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 PLEKHM3Q6ZWE6 761 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 SRLQ86TD4 932 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 KIAA2013Q8IYS2 634 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 XPO6Q96QU8 1125 aaKnown RBP12.06□□□□□ -0.48
LAMA4-201ENST00000230538 MOV10L1Q9BXT6 1211 aaKnown RBP12.06□□□□□ -0.48
LAMA4-201ENST00000230538 H2AFY2Q9P0M6 372 aaPredicted RBP12.06□□□□□ -0.48
LAMA4-201ENST00000230538 ZNRF3Q9ULT6 936 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 SNRPAP09012 282 aaKnown RBP12.06□□□□□ -0.48
LAMA4-201ENST00000230538 C6orf222P0C671 652 aaPredicted RBP12.06□□□□□ -0.48
LAMA4-201ENST00000230538 TCN1P20061 433 aaPredicted RBP12.06□□□□□ -0.48
LAMA4-201ENST00000230538 ITGA8P53708 1063 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 EDRF1Q3B7T1 1238 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 TRIM60Q495X7 471 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 GPAT2Q6NUI2 795 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 LVRNQ6Q4G3 990 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 PLA2G12BQ9BX93 195 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 PALMDQ9NP74 551 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 NYAP2Q9P242 653 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 PRR12Q9ULL5 1215 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 A0A1W2PQJ5 194 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 CLASP2O75122 1294 aaKnown RBP12.06□□□□□ -0.48
LAMA4-201ENST00000230538 GTF2H1P32780 548 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 ETFBP38117 255 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 SKOR1P84550 965 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 CENPCQ03188 943 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 STK4Q13043 487 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 PLEKHA8Q96JA3 519 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 GID8Q9NWU2 228 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 DOLKQ9UPQ8 538 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 PCDHB2Q9Y5E7 798 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 SLC9A1P19634 815 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 NBPF20Q3BBV1 942 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 C16orf86Q6ZW13 317 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 DCP1BQ8IZD4 617 aaKnown RBP12.06□□□□□ -0.48
LAMA4-201ENST00000230538 CYFIP2Q96F07 1278 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 ZIM3Q96PE6 472 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 APOL5Q9BWW9 433 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 FOXP3Q9BZS1 431 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 BLOC1S6Q9UL45 172 aa12.06□□□□□ -0.48
LAMA4-201ENST00000230538 GYPCP04921 128 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 NR3C2P08235 984 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 SOAT1P35610 550 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 SNRPFP62306 86 aaKnown RBP12.05□□□□□ -0.48
LAMA4-201ENST00000230538 EFCAB12Q6NXP0 572 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 PGBD3Q8N328 593 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 ERP27Q96DN0 273 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 CCDC134Q9H6E4 229 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 CNOT7Q9UIV1 285 aaKnown RBP12.05□□□□□ -0.48
LAMA4-201ENST00000230538 KCNQ2O43526 872 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 HNRNPCP07910 306 aaKnown RBP eCLIP12.05□□□□□ -0.48
LAMA4-201ENST00000230538 TMEM253P0C7T8 217 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 KCNK10P57789 538 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 SNAPC2Q13487 334 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 ZRANB3Q5FWF4 1079 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 CENPPQ6IPU0 288 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 PRPF39Q86UA1 669 aaKnown RBP12.05□□□□□ -0.48
LAMA4-201ENST00000230538 GALNT4Q8N4A0 578 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 GFM2Q969S9 779 aaKnown RBP12.05□□□□□ -0.48
LAMA4-201ENST00000230538 MXRA8Q9BRK3 442 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 SPATA16Q9BXB7 569 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 ROPN1BQ9BZX4 212 aaPredicted RBP12.05□□□□□ -0.48
LAMA4-201ENST00000230538 ROPN1Q9HAT0 212 aaPredicted RBP12.05□□□□□ -0.48
LAMA4-201ENST00000230538 LZTS1Q9Y250 596 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 CRB1P82279 1406 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 MYO3AQ8NEV4 1616 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 GSNP06396 782 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 RANBP1P43487 201 aa12.05□□□□□ -0.48
LAMA4-201ENST00000230538 ANTXR2P58335 489 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms