RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 THEM5Q8N1Q8 247 aa15.33■□□□□ 0.05
GPN3-201ENST00000228827 RDH13Q8NBN7 331 aa15.33■□□□□ 0.05
GPN3-201ENST00000228827 SCFD1Q8WVM8 642 aa15.33■□□□□ 0.05
GPN3-201ENST00000228827 PAGE5Q96GU1 130 aa15.33■□□□□ 0.05
GPN3-201ENST00000228827 PHOX2BQ99453 314 aa15.33■□□□□ 0.05
GPN3-201ENST00000228827 SEPT5Q99719 369 aaPredicted RBP15.33■□□□□ 0.05
GPN3-201ENST00000228827 PLA2G2FQ9BZM2 168 aa15.33■□□□□ 0.05
GPN3-201ENST00000228827 DNAJC25Q9H1X3 360 aa15.33■□□□□ 0.05
GPN3-201ENST00000228827 ARHGEF3Q9NR81 526 aa15.33■□□□□ 0.05
GPN3-201ENST00000228827 AGPAT3Q9NRZ7 376 aa15.33■□□□□ 0.05
GPN3-201ENST00000228827 FAM86C1Q9NVL1 165 aa15.33■□□□□ 0.05
GPN3-201ENST00000228827 PTPRJQ12913 1337 aa15.33■□□□□ 0.04
GPN3-201ENST00000228827 PVALEFA0A1B0GWK0 134 aa15.33■□□□□ 0.04
GPN3-201ENST00000228827 H0Y858 1186 aa15.33■□□□□ 0.04
GPN3-201ENST00000228827 GALR2O43603 387 aaPredicted RBP15.33■□□□□ 0.04
GPN3-201ENST00000228827 SLFN14P0C7P3 912 aa15.33■□□□□ 0.04
GPN3-201ENST00000228827 AOC1P19801 751 aa15.33■□□□□ 0.04
GPN3-201ENST00000228827 PLD1Q13393 1074 aa15.33■□□□□ 0.04
GPN3-201ENST00000228827 TANGO2Q6ICL3 276 aa15.33■□□□□ 0.04
GPN3-201ENST00000228827 PDCL2Q8N4E4 241 aa15.33■□□□□ 0.04
GPN3-201ENST00000228827 OR5B17Q8NGF7 314 aa15.33■□□□□ 0.04
GPN3-201ENST00000228827 ANKRD36BP1Q96IX9 119 aa15.33■□□□□ 0.04
GPN3-201ENST00000228827 ZSWIM3Q96MP5 696 aa15.33■□□□□ 0.04
GPN3-201ENST00000228827 TBC1D17Q9HA65 648 aa15.33■□□□□ 0.04
GPN3-201ENST00000228827 SLC2A4RGQ9NR83 387 aa15.33■□□□□ 0.04
GPN3-201ENST00000228827 INTS13Q9NVM9 706 aa15.33■□□□□ 0.04
GPN3-201ENST00000228827 SIX4Q9UIU6 781 aa15.33■□□□□ 0.04
GPN3-201ENST00000228827 ITGA11Q9UKX5 1188 aa15.33■□□□□ 0.04
GPN3-201ENST00000228827 MOSPD3O75425 235 aa15.32■□□□□ 0.04
GPN3-201ENST00000228827 CMA1P23946 247 aa15.32■□□□□ 0.04
GPN3-201ENST00000228827 HOXD11P31277 338 aaPredicted RBP15.32■□□□□ 0.04
GPN3-201ENST00000228827 RBP5P82980 135 aa15.32■□□□□ 0.04
GPN3-201ENST00000228827 TEAD2Q15562 447 aa15.32■□□□□ 0.04
GPN3-201ENST00000228827 MGAT5BQ3V5L5 792 aa15.32■□□□□ 0.04
GPN3-201ENST00000228827 FAM78AQ5JUQ0 283 aa15.32■□□□□ 0.04
GPN3-201ENST00000228827 LRRTM3Q86VH5 581 aa15.32■□□□□ 0.04
GPN3-201ENST00000228827 CXorf38Q8TB03 319 aa15.32■□□□□ 0.04
GPN3-201ENST00000228827 FAM200AQ8TCP9 573 aa15.32■□□□□ 0.04
GPN3-201ENST00000228827 ABI2Q9NYB9 513 aaPredicted RBP15.32■□□□□ 0.04
GPN3-201ENST00000228827 L1RE1Q9UN81 338 aa15.32■□□□□ 0.04
GPN3-201ENST00000228827 R3HCC1Q9Y3T6 440 aaKnown RBP15.32■□□□□ 0.04
GPN3-201ENST00000228827 SNX9Q9Y5X1 595 aa15.32■□□□□ 0.04
GPN3-201ENST00000228827 UBE4BO95155 1302 aa15.31■□□□□ 0.04
GPN3-201ENST00000228827 WDFY4Q6ZS81 3184 aa15.31■□□□□ 0.04
GPN3-201ENST00000228827 A0A1W2PRU2 124 aa15.31■□□□□ 0.04
GPN3-201ENST00000228827 KLRC4O43908 158 aa15.31■□□□□ 0.04
GPN3-201ENST00000228827 HUS1O60921 280 aa15.31■□□□□ 0.04
GPN3-201ENST00000228827 ECI2O75521 394 aa15.31■□□□□ 0.04
GPN3-201ENST00000228827 MICAL2O94851 1124 aa15.31■□□□□ 0.04
GPN3-201ENST00000228827 TNNC2P02585 160 aa15.31■□□□□ 0.04
GPN3-201ENST00000228827 DLATP10515 647 aaKnown RBP15.31■□□□□ 0.04
GPN3-201ENST00000228827 EPHA5P54756 1037 aa15.31■□□□□ 0.04
GPN3-201ENST00000228827 SNW1Q13573 536 aaKnown RBP15.31■□□□□ 0.04
GPN3-201ENST00000228827 SNRNP35Q16560 246 aaKnown RBP15.31■□□□□ 0.04
GPN3-201ENST00000228827 HS2ST1Q7LGA3 356 aa15.31■□□□□ 0.04
GPN3-201ENST00000228827 TMC8Q8IU68 726 aa15.31■□□□□ 0.04
GPN3-201ENST00000228827 LRRC52Q8N7C0 313 aa15.31■□□□□ 0.04
GPN3-201ENST00000228827 LEMD2Q8NC56 503 aa15.31■□□□□ 0.04
GPN3-201ENST00000228827 SHKBP1Q8TBC3 707 aa15.31■□□□□ 0.04
GPN3-201ENST00000228827 ATOH1Q92858 354 aaPredicted RBP15.31■□□□□ 0.04
GPN3-201ENST00000228827 LPIN3Q9BQK8 851 aa15.31■□□□□ 0.04
GPN3-201ENST00000228827 SLITRK6Q9H5Y7 841 aa15.31■□□□□ 0.04
GPN3-201ENST00000228827 KIAA1586Q9HCI6 787 aa15.31■□□□□ 0.04
GPN3-201ENST00000228827 ZNF334Q9HCZ1 680 aaPredicted RBP15.31■□□□□ 0.04
GPN3-201ENST00000228827 EXOC1Q9NV70 894 aa15.31■□□□□ 0.04
GPN3-201ENST00000228827 KMT2EQ8IZD2 1858 aa15.31■□□□□ 0.04
GPN3-201ENST00000228827 HCRTO43612 131 aa15.3■□□□□ 0.04
GPN3-201ENST00000228827 FCARP24071 287 aa15.3■□□□□ 0.04
GPN3-201ENST00000228827 ACAT1P24752 427 aaKnown RBP15.3■□□□□ 0.04
GPN3-201ENST00000228827 GRM2Q14416 872 aa15.3■□□□□ 0.04
GPN3-201ENST00000228827 SURF1Q15526 300 aa15.3■□□□□ 0.04
GPN3-201ENST00000228827 KNOP1Q1ED39 458 aaKnown RBP15.3■□□□□ 0.04
GPN3-201ENST00000228827 KMT5BQ4FZB7 885 aa15.3■□□□□ 0.04
GPN3-201ENST00000228827 DNAJB7Q7Z6W7 309 aaPredicted RBP15.3■□□□□ 0.04
GPN3-201ENST00000228827 WDR49Q8IV35 697 aa15.3■□□□□ 0.04
GPN3-201ENST00000228827 DCP1BQ8IZD4 617 aaKnown RBP15.3■□□□□ 0.04
GPN3-201ENST00000228827 XXYLT1Q8NBI6 393 aa15.3■□□□□ 0.04
GPN3-201ENST00000228827 GIPC2Q8TF65 315 aa15.3■□□□□ 0.04
GPN3-201ENST00000228827 PSMG2Q969U7 264 aa15.3■□□□□ 0.04
GPN3-201ENST00000228827 ELSPBP1Q96BH3 223 aa15.3■□□□□ 0.04
GPN3-201ENST00000228827 CCDC127Q96BQ5 260 aa15.3■□□□□ 0.04
GPN3-201ENST00000228827 ASB16Q96NS5 453 aa15.3■□□□□ 0.04
GPN3-201ENST00000228827 LRRC3Q9BY71 257 aa15.3■□□□□ 0.04
GPN3-201ENST00000228827 GDPD2Q9HCC8 539 aa15.3■□□□□ 0.04
GPN3-201ENST00000228827 ZFP14Q9HCL3 533 aa15.3■□□□□ 0.04
GPN3-201ENST00000228827 TMLHEQ9NVH6 421 aa15.3■□□□□ 0.04
GPN3-201ENST00000228827 DDX43Q9NXZ2 648 aaKnown RBP15.3■□□□□ 0.04
GPN3-201ENST00000228827 HPSEQ9Y251 543 aa15.3■□□□□ 0.04
GPN3-201ENST00000228827 MYO10Q9HD67 2058 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 DCNP07585 359 aaKnown RBP15.29■□□□□ 0.04
GPN3-201ENST00000228827 ATF6P18850 670 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 TNNI1P19237 187 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 VIPR2P41587 438 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 SYKP43405 635 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 TUFMP49411 452 aaKnown RBP15.29■□□□□ 0.04
GPN3-201ENST00000228827 MRE11P49959 708 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 NDUFA8P51970 172 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 NUBP1P53384 320 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 TSPY1Q01534 308 aa15.29■□□□□ 0.04
GPN3-201ENST00000228827 CYP24A1Q07973 514 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms