RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 NR1H3Q13133 447 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 MAPRE1Q15691 268 aaKnown RBP19.34■□□□□ 0.69
CLIP2-201ENST00000223398 GRIK4Q16099 956 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 SLC26A7Q8TE54 656 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 PPP1R13LQ8WUF5 828 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 MKNK1Q9BUB5 465 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 SMARCAL1Q9NZC9 954 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 ZNF212Q9UDV6 495 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 TIMM13Q9Y5L4 95 aaPredicted RBP19.34■□□□□ 0.69
CLIP2-201ENST00000223398 E2F6O75461 281 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 PTF1AQ7RTS3 328 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 CST8O60676 142 aa19.33■□□□□ 0.69
CLIP2-201ENST00000223398 WEE1P30291 646 aa19.33■□□□□ 0.69
CLIP2-201ENST00000223398 INPP1P49441 399 aa19.33■□□□□ 0.69
CLIP2-201ENST00000223398 CSE1LP55060 971 aaKnown RBP19.33■□□□□ 0.69
CLIP2-201ENST00000223398 E2F5Q15329 346 aa19.33■□□□□ 0.69
CLIP2-201ENST00000223398 ADGRF2Q8IZF7 708 aa19.33■□□□□ 0.69
CLIP2-201ENST00000223398 CYP2W1Q8TAV3 490 aa19.33■□□□□ 0.69
CLIP2-201ENST00000223398 ARHGEF38Q9NXL2 777 aa19.33■□□□□ 0.69
CLIP2-201ENST00000223398 TMEM132BQ14DG7 1078 aa19.33■□□□□ 0.69
CLIP2-201ENST00000223398 TMEM259Q4ZIN3 620 aa19.33■□□□□ 0.69
CLIP2-201ENST00000223398 TLK2Q86UE8 772 aa19.33■□□□□ 0.69
CLIP2-201ENST00000223398 ARHGEF26Q96DR7 871 aa19.33■□□□□ 0.69
CLIP2-201ENST00000223398 TUBB6Q9BUF5 446 aa19.33■□□□□ 0.69
CLIP2-201ENST00000223398 WDCPQ9H6R7 721 aa19.33■□□□□ 0.69
CLIP2-201ENST00000223398 MAP3K6O95382 1288 aa19.33■□□□□ 0.68
CLIP2-201ENST00000223398 LAMTOR4Q0VGL1 99 aa19.33■□□□□ 0.68
CLIP2-201ENST00000223398 VGLL4Q14135 290 aa19.33■□□□□ 0.68
CLIP2-201ENST00000223398 DHX34Q14147 1143 aaKnown RBP19.33■□□□□ 0.68
CLIP2-201ENST00000223398 FSCBQ5H9T9 825 aa19.33■□□□□ 0.68
CLIP2-201ENST00000223398 APOBEC3HQ6NTF7 200 aaKnown RBP19.33■□□□□ 0.68
CLIP2-201ENST00000223398 SPATA4Q8NEY3 305 aa19.33■□□□□ 0.68
CLIP2-201ENST00000223398 LZICQ8WZA0 190 aa19.33■□□□□ 0.68
CLIP2-201ENST00000223398 MRPS31Q92665 395 aaKnown RBP19.33■□□□□ 0.68
CLIP2-201ENST00000223398 NAB2Q15742 525 aa19.33■□□□□ 0.68
CLIP2-201ENST00000223398 CENPKQ9BS16 269 aa19.33■□□□□ 0.68
CLIP2-201ENST00000223398 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.33■□□□□ 0.68
CLIP2-201ENST00000223398 FAM205AQ6ZU69 1335 aa19.33■□□□□ 0.68
CLIP2-201ENST00000223398 MMP14P50281 582 aa19.33■□□□□ 0.68
CLIP2-201ENST00000223398 BEND6Q5SZJ8 279 aaPredicted RBP19.33■□□□□ 0.68
CLIP2-201ENST00000223398 FOPNLQ96NB1 174 aa19.33■□□□□ 0.68
CLIP2-201ENST00000223398 ZC3H7BQ9UGR2 993 aaKnown RBP19.33■□□□□ 0.68
CLIP2-201ENST00000223398 USP32Q8NFA0 1604 aa19.32■□□□□ 0.68
CLIP2-201ENST00000223398 HOXA2O43364 376 aa19.32■□□□□ 0.68
CLIP2-201ENST00000223398 BEX3Q00994 111 aa19.32■□□□□ 0.68
CLIP2-201ENST00000223398 MTG1Q9BT17 334 aaPredicted RBP19.32■□□□□ 0.68
CLIP2-201ENST00000223398 MDM2Q00987 491 aaPredicted RBP19.32■□□□□ 0.68
CLIP2-201ENST00000223398 LRRC1Q9BTT6 524 aa19.32■□□□□ 0.68
CLIP2-201ENST00000223398 ANLNQ9NQW6 1124 aa19.32■□□□□ 0.68
CLIP2-201ENST00000223398 SENP1Q9P0U3 644 aa19.32■□□□□ 0.68
CLIP2-201ENST00000223398 AKAP5P24588 427 aa19.32■□□□□ 0.68
CLIP2-201ENST00000223398 NR1I3Q14994 352 aa19.32■□□□□ 0.68
CLIP2-201ENST00000223398 TBCCQ15814 346 aa19.32■□□□□ 0.68
CLIP2-201ENST00000223398 USP50Q70EL3 339 aaPredicted RBP19.32■□□□□ 0.68
CLIP2-201ENST00000223398 DNERQ8NFT8 737 aa19.32■□□□□ 0.68
CLIP2-201ENST00000223398 PIP4K2CQ8TBX8 421 aa19.32■□□□□ 0.68
CLIP2-201ENST00000223398 SNTG2Q9NY99 539 aa19.32■□□□□ 0.68
CLIP2-201ENST00000223398 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.32■□□□□ 0.68
CLIP2-201ENST00000223398 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.32■□□□□ 0.68
CLIP2-201ENST00000223398 SLC11A2P49281 568 aa19.32■□□□□ 0.68
CLIP2-201ENST00000223398 ZNF177Q13360 481 aaPredicted RBP19.32■□□□□ 0.68
CLIP2-201ENST00000223398 SEC23AQ15436 765 aa19.32■□□□□ 0.68
CLIP2-201ENST00000223398 ZRANB3Q5FWF4 1079 aa19.32■□□□□ 0.68
CLIP2-201ENST00000223398 ACBD5Q5T8D3 534 aaPredicted RBP19.32■□□□□ 0.68
CLIP2-201ENST00000223398 ATP6V0D2Q8N8Y2 350 aa19.32■□□□□ 0.68
CLIP2-201ENST00000223398 FEZF2Q8TBJ5 459 aa19.32■□□□□ 0.68
CLIP2-201ENST00000223398 OSBPL8Q9BZF1 889 aa19.32■□□□□ 0.68
CLIP2-201ENST00000223398 IL17RBQ9NRM6 502 aa19.32■□□□□ 0.68
CLIP2-201ENST00000223398 FAM47DPA6NHR8 397 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 MAP3K7CLP57077 242 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 PDK1Q15118 436 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 CXCL8P10145 99 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 ADCYAP1R1P41586 468 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 TRAPPC11Q7Z392 1133 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 ARHGAP18Q8N392 663 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 C9orf72Q96LT7 481 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 CINPQ9BW66 212 aaPredicted RBP19.31■□□□□ 0.68
CLIP2-201ENST00000223398 PPP1R3GB7ZBB8 358 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 PLSCR1O15162 318 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 BYSLQ13895 437 aaKnown RBP19.31■□□□□ 0.68
CLIP2-201ENST00000223398 GIT2Q14161 759 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 USP10Q14694 798 aaKnown RBP19.31■□□□□ 0.68
CLIP2-201ENST00000223398 GRAMD1BQ3KR37 738 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 PTRHD1Q6GMV3 140 aaKnown RBP19.31■□□□□ 0.68
CLIP2-201ENST00000223398 TEKT4Q8WW24 435 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 C20orf96Q9NUD7 363 aaPredicted RBP19.31■□□□□ 0.68
CLIP2-201ENST00000223398 USP20Q9Y2K6 914 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 SSU72P8A0A1W2PR75 194 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 SGPL1O95470 568 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 RPSAP08865 295 aaKnown RBP19.31■□□□□ 0.68
CLIP2-201ENST00000223398 AKR1A1P14550 325 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 ALDH5A1P51649 535 aaPredicted RBP19.31■□□□□ 0.68
CLIP2-201ENST00000223398 ERVK-9P63128 1117 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 ERVK-24P63145 666 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 SPDYAQ5MJ70 313 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 CARNMT1Q8N4J0 409 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 RFWD2Q8NHY2 731 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 CHMP2BQ9UQN3 213 aa19.31■□□□□ 0.68
CLIP2-201ENST00000223398 TMEM150BA6NC51 233 aa19.3■□□□□ 0.68
CLIP2-201ENST00000223398 ZNF263O14978 683 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms