RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 ISCUQ9H1K1 167 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 EPN3Q9H201 632 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 ANLNQ9NQW6 1124 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 AIPL1Q9NZN9 384 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 PAK5Q9P286 719 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 LAMB4A4D0S4 1761 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 GAS2O43903 313 aaKnown RBP12.06□□□□□ -0.48
NOD1-201ENST00000222823 TADA2AO75478 443 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 ANP32DO95626 131 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 SMTNL2Q2TAL5 461 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 GTF3C2Q8WUA4 911 aaPredicted RBP12.06□□□□□ -0.48
NOD1-201ENST00000222823 GMCL1Q96IK5 515 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 ZIM3Q96PE6 472 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 PRMT1Q99873 361 aaKnown RBP12.06□□□□□ -0.48
NOD1-201ENST00000222823 TRIM54Q9BYV2 358 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 ECT2Q9H8V3 914 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 XAB2Q9HCS7 855 aaKnown RBP12.06□□□□□ -0.48
NOD1-201ENST00000222823 SPATS2LQ9NUQ6 558 aaKnown RBP12.06□□□□□ -0.48
NOD1-201ENST00000222823 NDFIP2Q9NV92 336 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 ARHGAP20Q9P2F6 1191 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 XPO7Q9UIA9 1087 aaKnown RBP12.06□□□□□ -0.48
NOD1-201ENST00000222823 CHMP2BQ9UQN3 213 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 TMX2Q9Y320 296 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 TMEM247A6NEH6 219 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 DDTLA6NHG4 134 aaPredicted RBP12.06□□□□□ -0.48
NOD1-201ENST00000222823 OGTO15294 1046 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 SASH3O75995 380 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 MAGEA4P43358 317 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 GIT2Q14161 759 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 UGP2Q16851 508 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 C3orf62Q6ZUJ4 267 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 TPCN2Q8NHX9 752 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 UBA3Q8TBC4 463 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 MMTAG2Q9BU76 263 aaKnown RBP12.06□□□□□ -0.48
NOD1-201ENST00000222823 EHD4Q9H223 541 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 SLC38A7Q9NVC3 462 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.06□□□□□ -0.48
NOD1-201ENST00000222823 PSMC3IPQ9P2W1 217 aaPredicted RBP12.06□□□□□ -0.48
NOD1-201ENST00000222823 BCL9LQ86UU0 1499 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 FAM47DPA6NHR8 397 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 MUTP22033 750 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 ACADSBP45954 432 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 ARHGDIAP52565 204 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 ZNF200P98182 395 aaPredicted RBP12.06□□□□□ -0.48
NOD1-201ENST00000222823 ACTN3Q08043 901 aaPredicted RBP12.06□□□□□ -0.48
NOD1-201ENST00000222823 DCAF6Q58WW2 860 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 GNASQ5JWF2 1037 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 C15orf52Q6ZUT6 534 aaKnown RBP12.06□□□□□ -0.48
NOD1-201ENST00000222823 CNPY4Q8N129 248 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 CBWD1Q9BRT8 395 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 CAPN6Q9Y6Q1 641 aa12.06□□□□□ -0.48
NOD1-201ENST00000222823 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.06□□□□□ -0.48
NOD1-201ENST00000222823 CCDC78A2IDD5 438 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 ITGA4P13612 1032 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 BRD2P25440 801 aaKnown RBP12.05□□□□□ -0.48
NOD1-201ENST00000222823 INPP1P49441 399 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 ZNF157P51786 506 aaPredicted RBP12.05□□□□□ -0.48
NOD1-201ENST00000222823 CAPRIN1Q14444 709 aaKnown RBP12.05□□□□□ -0.48
NOD1-201ENST00000222823 RABGAP1LQ5R372 815 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 TEDDM1Q5T9Z0 273 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 GLB1LQ6UWU2 654 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 SLC13A5Q86YT5 568 aaPredicted RBP12.05□□□□□ -0.48
NOD1-201ENST00000222823 C4orf32Q8N8J7 132 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 PABPC5Q96DU9 382 aaKnown RBP12.05□□□□□ -0.48
NOD1-201ENST00000222823 CLMNQ96JQ2 1002 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 PPCSQ9HAB8 311 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 IRAK4Q9NWZ3 460 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 GGT7Q9UJ14 662 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 PRDM4Q9UKN5 801 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 KCNH4Q9UQ05 1017 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 RRN3P2A6NIE6 340 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 EIF3HO15372 352 aaKnown RBP eCLIP12.05□□□□□ -0.48
NOD1-201ENST00000222823 GFAPP14136 432 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 BOLA3Q53S33 107 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 ZBTB41Q5SVQ8 909 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 ACAD10Q6JQN1 1059 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 COL23A1Q86Y22 540 aaPredicted RBP12.05□□□□□ -0.48
NOD1-201ENST00000222823 USP33Q8TEY7 942 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 PNMA5Q96PV4 448 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 XPO6Q96QU8 1125 aaKnown RBP12.05□□□□□ -0.48
NOD1-201ENST00000222823 EHD2Q9NZN4 543 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 TRPM3Q9HCF6 1732 aaPredicted RBP12.05□□□□□ -0.48
NOD1-201ENST00000222823 PHF20L1A8MW92 1017 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 GPD1P21695 349 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 ITGA8P53708 1063 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 CUL2Q13617 745 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 SLC29A2Q14542 456 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 PDCD2Q16342 344 aaPredicted RBP12.05□□□□□ -0.48
NOD1-201ENST00000222823 DGKDQ16760 1214 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 DCAF4L1Q3SXM0 396 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 SEZ6Q53EL9 994 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 RPAINQ86UA6 219 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 C1orf131Q8NDD1 294 aaKnown RBP12.05□□□□□ -0.48
NOD1-201ENST00000222823 ROPN1BQ9BZX4 212 aaPredicted RBP12.05□□□□□ -0.48
NOD1-201ENST00000222823 TRPV6Q9H1D0 765 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 ROPN1Q9HAT0 212 aaPredicted RBP12.05□□□□□ -0.48
NOD1-201ENST00000222823 PIDD1Q9HB75 910 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 SMAPO00193 183 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 IFNA8P32881 189 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 HADHAP40939 763 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms