RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 ZC3H11AO75152 810 aaKnown RBP eCLIP16.83■□□□□ 0.28
SF3A2-201ENST00000221494 DLG4P78352 724 aa16.83■□□□□ 0.28
SF3A2-201ENST00000221494 KLC1Q07866 573 aa16.83■□□□□ 0.28
SF3A2-201ENST00000221494 MTA1Q13330 715 aa16.83■□□□□ 0.28
SF3A2-201ENST00000221494 FYB2Q5VWT5 728 aa16.83■□□□□ 0.28
SF3A2-201ENST00000221494 IZUMO3Q5VZ72 239 aa16.83■□□□□ 0.28
SF3A2-201ENST00000221494 SLC30A10Q6XR72 485 aa16.83■□□□□ 0.28
SF3A2-201ENST00000221494 LBX2Q6XYB7 198 aa16.83■□□□□ 0.28
SF3A2-201ENST00000221494 DDX1Q92499 740 aaKnown RBP16.83■□□□□ 0.28
SF3A2-201ENST00000221494 DDX27Q96GQ7 796 aaKnown RBP16.83■□□□□ 0.28
SF3A2-201ENST00000221494 SMC6Q96SB8 1091 aa16.83■□□□□ 0.28
SF3A2-201ENST00000221494 POP1Q99575 1024 aaKnown RBP16.83■□□□□ 0.28
SF3A2-201ENST00000221494 TEKT3Q9BXF9 490 aa16.83■□□□□ 0.28
SF3A2-201ENST00000221494 CYLDQ9NQC7 956 aa16.83■□□□□ 0.28
SF3A2-201ENST00000221494 OTOFQ9HC10 1997 aa16.83■□□□□ 0.28
SF3A2-201ENST00000221494 UNCXA6NJT0 531 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 SOCS7O14512 581 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 ATMINO43313 823 aaPredicted RBP16.82■□□□□ 0.28
SF3A2-201ENST00000221494 SKAP2O75563 359 aaPredicted RBP16.82■□□□□ 0.28
SF3A2-201ENST00000221494 GSTA2P09210 222 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 CETPP11597 493 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 MARK3P27448 753 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 PCK1P35558 622 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 GJA5P36382 358 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 CETN2P41208 172 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 GCLMP48507 274 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 GTF2BQ00403 316 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 CCDC142Q17RM4 750 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 KRT39Q6A163 491 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 SLC47A2Q86VL8 602 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 KSR1Q8IVT5 923 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 KATNAL2Q8IYT4 538 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 DAW1Q8N136 415 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 ZNF513Q8N8E2 541 aaPredicted RBP16.82■□□□□ 0.28
SF3A2-201ENST00000221494 IL31RAQ8NI17 732 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 TMC2Q8TDI7 906 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 ITFG2Q969R8 447 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 NT5C1BQ96P26 610 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 TAAR1Q96RJ0 339 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 MLXIPLQ9NP71 852 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 HSPBP1Q9NZL4 362 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 NKX1-2Q9UD57 310 aaPredicted RBP16.82■□□□□ 0.28
SF3A2-201ENST00000221494 ANAPC7Q9UJX3 599 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 EXOC1LA0A1B0GW35 172 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 KLRC2P26717 231 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 CTCFP49711 727 aaPredicted RBP16.82■□□□□ 0.28
SF3A2-201ENST00000221494 SNX1Q13596 522 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 BAATQ14032 418 aaPredicted RBP16.82■□□□□ 0.28
SF3A2-201ENST00000221494 TMED2Q15363 201 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 TKFCQ3LXA3 575 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 NSMFQ6X4W1 530 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 LONP2Q86WA8 852 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 DNAJC9Q8WXX5 260 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 SLC10A4Q96EP9 437 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 TRABDQ9H4I3 376 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 ZNF408Q9H9D4 720 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 TMEM8AQ9HCN3 771 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 ASB3Q9Y575 518 aa16.82■□□□□ 0.28
SF3A2-201ENST00000221494 KLHL33A6NCF5 533 aa16.81■□□□□ 0.28
SF3A2-201ENST00000221494 T-ENOLP0DO92 83 aa16.81■□□□□ 0.28
SF3A2-201ENST00000221494 PLS3P13797 630 aa16.81■□□□□ 0.28
SF3A2-201ENST00000221494 ITGB5P18084 799 aa16.81■□□□□ 0.28
SF3A2-201ENST00000221494 OCRLQ01968 901 aa16.81■□□□□ 0.28
SF3A2-201ENST00000221494 SLC30A9Q6PML9 568 aa16.81■□□□□ 0.28
SF3A2-201ENST00000221494 ANKRD23Q86SG2 305 aa16.81■□□□□ 0.28
SF3A2-201ENST00000221494 EXD1Q8NHP7 514 aa16.81■□□□□ 0.28
SF3A2-201ENST00000221494 HELQQ8TDG4 1101 aa16.81■□□□□ 0.28
SF3A2-201ENST00000221494 RBM15Q96T37 977 aaKnown RBP eCLIP16.81■□□□□ 0.28
SF3A2-201ENST00000221494 MXRA8Q9BRK3 442 aa16.81■□□□□ 0.28
SF3A2-201ENST00000221494 MMADHCQ9H3L0 296 aaPredicted RBP16.81■□□□□ 0.28
SF3A2-201ENST00000221494 EXOC7Q9UPT5 735 aa16.81■□□□□ 0.28
SF3A2-201ENST00000221494 AGTPBP1Q9UPW5 1226 aa16.81■□□□□ 0.28
SF3A2-201ENST00000221494 LRCH1Q9Y2L9 728 aa16.81■□□□□ 0.28
SF3A2-201ENST00000221494 GSTTP1A0A1W2PQM5 241 aa16.8■□□□□ 0.28
SF3A2-201ENST00000221494 PROSCO94903 275 aa16.8■□□□□ 0.28
SF3A2-201ENST00000221494 SNUPNO95149 360 aaKnown RBP16.8■□□□□ 0.28
SF3A2-201ENST00000221494 TROVE2P10155 538 aaKnown RBP eCLIP16.8■□□□□ 0.28
SF3A2-201ENST00000221494 ARP10275 920 aa16.8■□□□□ 0.28
SF3A2-201ENST00000221494 RRM1P23921 792 aa16.8■□□□□ 0.28
SF3A2-201ENST00000221494 ADSSP30520 456 aa16.8■□□□□ 0.28
SF3A2-201ENST00000221494 VHLP40337 213 aa16.8■□□□□ 0.28
SF3A2-201ENST00000221494 BPIFB4P59827 614 aa16.8■□□□□ 0.28
SF3A2-201ENST00000221494 GCNT1Q02742 428 aa16.8■□□□□ 0.28
SF3A2-201ENST00000221494 PCNX4Q63HM2 1172 aa16.8■□□□□ 0.28
SF3A2-201ENST00000221494 PADI6Q6TGC4 694 aa16.8■□□□□ 0.28
SF3A2-201ENST00000221494 RHOT1Q8IXI2 618 aa16.8■□□□□ 0.28
SF3A2-201ENST00000221494 PPM1KQ8N3J5 372 aa16.8■□□□□ 0.28
SF3A2-201ENST00000221494 BTBD6Q96KE9 485 aa16.8■□□□□ 0.28
SF3A2-201ENST00000221494 TSC22D3Q99576 134 aa16.8■□□□□ 0.28
SF3A2-201ENST00000221494 LXNQ9BS40 222 aa16.8■□□□□ 0.28
SF3A2-201ENST00000221494 ASCC2Q9H1I8 757 aaPredicted RBP16.8■□□□□ 0.28
SF3A2-201ENST00000221494 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.8■□□□□ 0.282e-8■■■■■ 51.3
SF3A2-201ENST00000221494 BTBD7Q9P203 1132 aa16.8■□□□□ 0.28
SF3A2-201ENST00000221494 HAO1Q9UJM8 370 aa16.8■□□□□ 0.28
SF3A2-201ENST00000221494 PARP14Q460N5 1801 aa16.8■□□□□ 0.28
SF3A2-201ENST00000221494 DNALI1O14645 258 aaPredicted RBP16.8■□□□□ 0.28
SF3A2-201ENST00000221494 PEX10O60683 326 aa16.8■□□□□ 0.28
SF3A2-201ENST00000221494 CCDC22O60826 627 aa16.8■□□□□ 0.28
SF3A2-201ENST00000221494 LYPLA2O95372 231 aa16.8■□□□□ 0.28
SF3A2-201ENST00000221494 UNGP13051 313 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms