RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 AGBL1Q96MI9 1066 aa11.03□□□□□ -0.64
TRPS1-201ENST00000220888 DMAP1Q9NPF5 467 aaPredicted RBP11.03□□□□□ -0.64
TRPS1-201ENST00000220888 DCTN4Q9UJW0 460 aa11.03□□□□□ -0.64
TRPS1-201ENST00000220888 CDK12Q9NYV4 1490 aaPredicted RBP11.03□□□□□ -0.64
TRPS1-201ENST00000220888 AP1G2O75843 785 aa11.03□□□□□ -0.64
TRPS1-201ENST00000220888 HDAC4P56524 1084 aa11.03□□□□□ -0.64
TRPS1-201ENST00000220888 TGM3Q08188 693 aa11.03□□□□□ -0.64
TRPS1-201ENST00000220888 CES5AQ6NT32 575 aa11.03□□□□□ -0.64
TRPS1-201ENST00000220888 RGS9BPQ6ZS82 235 aa11.03□□□□□ -0.64
TRPS1-201ENST00000220888 RGL4Q8IZJ4 473 aa11.03□□□□□ -0.64
TRPS1-201ENST00000220888 CPA5Q8WXQ8 436 aa11.03□□□□□ -0.64
TRPS1-201ENST00000220888 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.03□□□□□ -0.64
TRPS1-201ENST00000220888 PPP1R14AQ96A00 147 aa11.03□□□□□ -0.64
TRPS1-201ENST00000220888 AHCYL2Q96HN2 611 aaKnown RBP11.03□□□□□ -0.64
TRPS1-201ENST00000220888 MCEEQ96PE7 176 aa11.03□□□□□ -0.64
TRPS1-201ENST00000220888 NIF3L1Q9GZT8 377 aa11.03□□□□□ -0.64
TRPS1-201ENST00000220888 HMX1Q9NP08 348 aaPredicted RBP11.03□□□□□ -0.64
TRPS1-201ENST00000220888 RAB6BQ9NRW1 208 aa11.03□□□□□ -0.64
TRPS1-201ENST00000220888 C20orf96Q9NUD7 363 aaPredicted RBP11.03□□□□□ -0.64
TRPS1-201ENST00000220888 WWOXQ9NZC7 414 aa11.03□□□□□ -0.64
TRPS1-201ENST00000220888 APPL1Q9UKG1 709 aa11.03□□□□□ -0.64
TRPS1-201ENST00000220888 FAM50BQ9Y247 325 aa11.03□□□□□ -0.64
TRPS1-201ENST00000220888 SEC31AO94979 1220 aaKnown RBP11.03□□□□□ -0.64
TRPS1-201ENST00000220888 PGK2P07205 417 aa11.03□□□□□ -0.64
TRPS1-201ENST00000220888 EPHB2P29323 1055 aa11.03□□□□□ -0.64
TRPS1-201ENST00000220888 OXCT1P55809 520 aa11.03□□□□□ -0.64
TRPS1-201ENST00000220888 CNTN1Q12860 1018 aa11.03□□□□□ -0.64
TRPS1-201ENST00000220888 TRIM28Q13263 835 aaKnown RBP11.03□□□□□ -0.64
TRPS1-201ENST00000220888 ZNF614Q8N883 585 aa11.03□□□□□ -0.64
TRPS1-201ENST00000220888 FAM161BQ96MY7 647 aa11.03□□□□□ -0.64
TRPS1-201ENST00000220888 F8W810 466 aa11.02□□□□□ -0.64
TRPS1-201ENST00000220888 SPTLC1O15269 473 aa11.02□□□□□ -0.64
TRPS1-201ENST00000220888 CYP2C8P10632 490 aa11.02□□□□□ -0.64
TRPS1-201ENST00000220888 ACO1P21399 889 aaKnown RBP11.02□□□□□ -0.64
TRPS1-201ENST00000220888 NAPEPLDQ6IQ20 393 aa11.02□□□□□ -0.64
TRPS1-201ENST00000220888 UBA3Q8TBC4 463 aa11.02□□□□□ -0.64
TRPS1-201ENST00000220888 ABHD10Q9NUJ1 306 aa11.02□□□□□ -0.64
TRPS1-201ENST00000220888 DPP3Q9NY33 737 aa11.02□□□□□ -0.64
TRPS1-201ENST00000220888 KANSL3Q9P2N6 904 aa11.02□□□□□ -0.64
TRPS1-201ENST00000220888 VPS28Q9UK41 221 aa11.02□□□□□ -0.64
TRPS1-201ENST00000220888 NPHP3-ACAD11A0A0J9YXS1 232 aa11.02□□□□□ -0.64
TRPS1-201ENST00000220888 ATP5HO75947 161 aa11.02□□□□□ -0.64
TRPS1-201ENST00000220888 HLA-DRAP01903 254 aa11.02□□□□□ -0.64
TRPS1-201ENST00000220888 GPD1P21695 349 aa11.02□□□□□ -0.64
TRPS1-201ENST00000220888 INPP5AQ14642 412 aa11.02□□□□□ -0.64
TRPS1-201ENST00000220888 BARGINQ6ZT62 677 aa11.02□□□□□ -0.64
TRPS1-201ENST00000220888 EFL1Q7Z2Z2 1120 aaKnown RBP11.02□□□□□ -0.64
TRPS1-201ENST00000220888 CD302Q8IX05 232 aa11.02□□□□□ -0.64
TRPS1-201ENST00000220888 ARHGEF26Q96DR7 871 aa11.02□□□□□ -0.64
TRPS1-201ENST00000220888 WDCPQ9H6R7 721 aa11.02□□□□□ -0.64
TRPS1-201ENST00000220888 ACTR5Q9H9F9 607 aaPredicted RBP11.02□□□□□ -0.64
TRPS1-201ENST00000220888 CYP4F11Q9HBI6 524 aa11.02□□□□□ -0.64
TRPS1-201ENST00000220888 RIC8BQ9NVN3 520 aa11.02□□□□□ -0.64
TRPS1-201ENST00000220888 ADGRA2Q96PE1 1338 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 MYO1GB0I1T2 1018 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 GOLGA8TH3BQL2 631 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 EXTL3O43909 919 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 CCDC22O60826 627 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 ATP1A3P13637 1013 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 CDC16Q13042 620 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 GLRA4Q5JXX5 417 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 ATL2Q8NHH9 583 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 ANKEF1Q9NU02 776 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 DDIT4Q9NX09 232 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 RPS6KB2Q9UBS0 482 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 LIMA1Q9UHB6 759 aaKnown RBP11.02□□□□□ -0.65
TRPS1-201ENST00000220888 AURKCQ9UQB9 309 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 PPP2R3BQ9Y5P8 575 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 RGL2O15211 777 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 NKRFO15226 690 aaKnown RBP eCLIP11.02□□□□□ -0.65
TRPS1-201ENST00000220888 ANXA9O76027 345 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 LARGE1O95461 756 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 PBLDP30039 288 aaPredicted RBP11.02□□□□□ -0.65
TRPS1-201ENST00000220888 GPC1P35052 558 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 MMP14P50281 582 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 MAP1SQ66K74 1059 aaPredicted RBP11.02□□□□□ -0.65
TRPS1-201ENST00000220888 CLEC10AQ8IUN9 316 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 NUP93Q8N1F7 819 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 XPO6Q96QU8 1125 aaKnown RBP11.02□□□□□ -0.65
TRPS1-201ENST00000220888 TASP1Q9H6P5 420 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 RASSF10A6NK89 507 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 EVPLLA8MZ36 301 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 SLC26A4O43511 780 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 ITGB3P05106 788 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 RPSAP08865 295 aaKnown RBP11.02□□□□□ -0.65
TRPS1-201ENST00000220888 WEE2P0C1S8 567 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 TNNI3P19429 210 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 RPS6P62753 249 aaKnown RBP11.02□□□□□ -0.65
TRPS1-201ENST00000220888 POU4F1Q01851 419 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 SBK1Q52WX2 424 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 HIBCHQ6NVY1 386 aaPredicted RBP11.02□□□□□ -0.65
TRPS1-201ENST00000220888 SARM1Q6SZW1 724 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 TAAR1Q96RJ0 339 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 HTATIP2Q9BUP3 242 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 UVRAGQ9P2Y5 699 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 APEX2Q9UBZ4 518 aa11.02□□□□□ -0.65
TRPS1-201ENST00000220888 ZC3H7BQ9UGR2 993 aaKnown RBP11.02□□□□□ -0.65
TRPS1-201ENST00000220888 TRMT6Q9UJA5 497 aaKnown RBP11.02□□□□□ -0.65
TRPS1-201ENST00000220888 SYCP2LQ5T4T6 812 aa11.01□□□□□ -0.65
TRPS1-201ENST00000220888 RD3Q7Z3Z2 195 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms