RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 CDR2LQ86X02 465 aaPredicted RBP11.12□□□□□ -0.63
VPS18-201ENST00000220509 CTAGE3PQ8IX95 158 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 SRRM1Q8IYB3 904 aaKnown RBP11.12□□□□□ -0.63
VPS18-201ENST00000220509 SAMD14Q8IZD0 417 aaPredicted RBP11.12□□□□□ -0.63
VPS18-201ENST00000220509 RNF149Q8NC42 400 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 SYTL5Q8TDW5 730 aaPredicted RBP11.12□□□□□ -0.63
VPS18-201ENST00000220509 POP1Q99575 1024 aaKnown RBP11.12□□□□□ -0.63
VPS18-201ENST00000220509 CALN1Q9BXU9 219 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 FBXO40Q9UH90 709 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 NOD1Q9Y239 953 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 SH3GLB1Q9Y371 365 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 NHSQ6T4R5 1651 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 CACNA1SQ13698 1873 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 ADM5C9JUS6 153 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 SGK1O00141 431 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 MTRF1O75570 445 aaKnown RBP11.12□□□□□ -0.63
VPS18-201ENST00000220509 STAT5BP51692 787 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 CSE1LP55060 971 aaKnown RBP11.12□□□□□ -0.63
VPS18-201ENST00000220509 ZNF568Q3ZCX4 644 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 C2CD6Q53TS8 623 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 RASIP1Q5U651 963 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 C1orf228Q6PIY5 440 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 SIAH1Q8IUQ4 282 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 SLC15A3Q8IY34 581 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 FLCNQ8NFG4 579 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 GRK7Q8WTQ7 553 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 ZFAND2BQ8WV99 257 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 MAELQ96JY0 434 aaKnown RBP11.12□□□□□ -0.63
VPS18-201ENST00000220509 FGD4Q96M96 766 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 LRRC4CQ9HCJ2 640 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 DLGAP2Q9P1A6 1054 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 PHF24Q9UPV7 400 aa11.12□□□□□ -0.63
VPS18-201ENST00000220509 TISP43B9A030 160 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 FDX1P10109 184 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 SLC12A3P55017 1021 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 POU5F1Q01860 360 aaKnown RBP11.11□□□□□ -0.63
VPS18-201ENST00000220509 WASHC5Q12768 1159 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 PPP2R5DQ14738 602 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 C9orf131Q5VYM1 1079 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 LRRC55Q6ZSA7 311 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 SUN5Q8TC36 379 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 DTX3LQ8TDB6 740 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 MRIQ9BWK5 157 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 MOV10L1Q9BXT6 1211 aaKnown RBP11.11□□□□□ -0.63
VPS18-201ENST00000220509 SEMA4AQ9H3S1 761 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 VCX3AQ9NNX9 186 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 KCNMB3Q9NPA1 279 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 HESX1Q9UBX0 185 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 TMED5Q9Y3A6 229 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 ZNF541Q9H0D2 1346 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 MIF4GDA9UHW6 222 aaKnown RBP11.11□□□□□ -0.63
VPS18-201ENST00000220509 CYP1A2P05177 515 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 CCNA1P78396 465 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 KRT81Q14533 505 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 XKR3Q5GH77 459 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 ANKRD20A2Q5SQ80 823 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 ANKRD20A1Q5TYW2 823 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 ANKRD20A3Q5VUR7 823 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 CASC4Q6P4E1 433 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 C1orf54Q8WWF1 131 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 CPA5Q8WXQ8 436 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 TMEM237Q96Q45 408 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 NUDCD1Q96RS6 583 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 SRPK1Q96SB4 655 aaKnown RBP11.11□□□□□ -0.63
VPS18-201ENST00000220509 SIKE1Q9BRV8 207 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 MKNK1Q9BUB5 465 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 TARS2Q9BW92 718 aaKnown RBP11.11□□□□□ -0.63
VPS18-201ENST00000220509 KCND2Q9NZV8 630 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 TXNDC16Q9P2K2 825 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 DDHD2O94830 711 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 PARNO95453 639 aaKnown RBP11.11□□□□□ -0.63
VPS18-201ENST00000220509 USP46P62068 366 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 EMC10Q5UCC4 262 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 ZC3H18Q86VM9 953 aaKnown RBP11.11□□□□□ -0.63
VPS18-201ENST00000220509 CCT6BQ92526 530 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 PDCD2LQ9BRP1 358 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 FAM129AQ9BZQ8 928 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 THAP2Q9H0W7 228 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 RPF1Q9H9Y2 349 aaKnown RBP11.11□□□□□ -0.63
VPS18-201ENST00000220509 OSGEPQ9NPF4 335 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 PPP1R9AQ9ULJ8 1098 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 SIK3Q9Y2K2 1263 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 SYNGAP1Q96PV0 1343 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 CCDC88AQ3V6T2 1871 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 NID2Q14112 1375 aa11.11□□□□□ -0.63
VPS18-201ENST00000220509 KRT16P08779 473 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 HSPA6P17066 643 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 DDX5P17844 614 aaKnown RBP11.1□□□□□ -0.63
VPS18-201ENST00000220509 GNA15P30679 374 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 TUBA1BP68363 451 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 MEI1Q5TIA1 1274 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 AADACL2Q6P093 401 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 LRIG3Q6UXM1 1119 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 TUBA1AQ71U36 451 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 TMC3Q7Z5M5 1100 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 FAM83AQ86UY5 434 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 TNIP2Q8NFZ5 429 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 RNF34Q969K3 372 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 FAM149B1Q96BN6 582 aa11.1□□□□□ -0.63
VPS18-201ENST00000220509 TTYH3Q9C0H2 523 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms