RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 TRIM45Q9H8W5 580 aaPredicted RBP11.54□□□□□ -0.56
USP31-201ENST00000219689 ZFYVE1Q9HBF4 777 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 WDR37Q9Y2I8 494 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 CCDC182A6NF36 153 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 PSMG1O95456 288 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 IST1P53990 364 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 NECTIN1Q15223 517 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 DDI2Q5TDH0 399 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 FAM45BPQ6NSW5 357 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 SAPCD2Q86UD0 394 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 ZBTB8OSQ8IWT0 167 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 DGCR6LQ9BY27 220 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 SEMA6AQ9H2E6 1030 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 NME5P56597 212 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 CCDC153Q494R4 210 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 PIF1Q9H611 641 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 ZNF222Q9UK12 451 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 MED26O95402 600 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 PPARGP37231 505 aaPredicted RBP11.54□□□□□ -0.56
USP31-201ENST00000219689 LGALS3BPQ08380 585 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 TCP10Q12799 353 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 CSTF3Q12996 717 aaKnown RBP11.54□□□□□ -0.56
USP31-201ENST00000219689 TTMPQ5BVD1 217 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 CYP4A22Q5TCH4 519 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 GET4Q7L5D6 327 aaPredicted RBP11.54□□□□□ -0.56
USP31-201ENST00000219689 SPEF1Q9Y4P9 236 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 TESPA1A2RU30 521 aaPredicted RBP11.54□□□□□ -0.56
USP31-201ENST00000219689 PWP1Q13610 501 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 DENND6AQ8IWF6 608 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 SPICE1Q8N0Z3 855 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 CTNNAL1Q9UBT7 734 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 IP6K2Q9UHH9 426 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 DDR1Q08345 913 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 SPDYAQ5MJ70 313 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 OR6B2Q6IFH4 312 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 LRRC8DQ7L1W4 858 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 TSPAN14Q8NG11 270 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 PABPC3Q9H361 631 aaKnown RBP11.54□□□□□ -0.56
USP31-201ENST00000219689 ADD3Q9UEY8 706 aaKnown RBP11.54□□□□□ -0.56
USP31-201ENST00000219689 ANKRD40Q6AI12 368 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 PSMA8Q8TAA3 256 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 COX4I2Q96KJ9 171 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 PNMA3Q9UL41 463 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 SLC12A4Q9UP95 1085 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 NOD1Q9Y239 953 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 KDM6BO15054 1643 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 SHROOM2Q13796 1616 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 FOXP2O15409 715 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 ITIH2P19823 946 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 GEMIN4P57678 1058 aaKnown RBP11.54□□□□□ -0.56
USP31-201ENST00000219689 XRCC4Q13426 336 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 INTS13Q9NVM9 706 aa11.54□□□□□ -0.56
USP31-201ENST00000219689 TAF2Q6P1X5 1199 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 HPS3Q969F9 1004 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 A0A1W2PQ72 361 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 PRPF3O43395 683 aaKnown RBP11.53□□□□□ -0.56
USP31-201ENST00000219689 RTN3O95197 1032 aaPredicted RBP11.53□□□□□ -0.56
USP31-201ENST00000219689 FCER1AP12319 257 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 KRT20P35900 424 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 KPNA1P52294 538 aaPredicted RBP11.53□□□□□ -0.56
USP31-201ENST00000219689 OSBPL10Q9BXB5 764 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 AIPL1Q9NZN9 384 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 RABL2BQ9UNT1 228 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 MROH5Q6ZUA9 1318 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 FAM153BP0C7A2 387 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 NUP62P37198 522 aaPredicted RBP11.53□□□□□ -0.56
USP31-201ENST00000219689 SLC5A9Q2M3M2 681 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 FAM153CQ494X1 144 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 P3H2Q8IVL5 708 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 NAT14Q8WUY8 206 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 TEKT3Q9BXF9 490 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 ARIH2O95376 493 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 PGBD4Q96DM1 585 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 CASS4Q9NQ75 786 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 UNC45BQ8IWX7 931 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 OXER1Q8TDS5 423 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 TRPM1Q7Z4N2 1603 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 MSL3Q8N5Y2 521 aaKnown RBP11.53□□□□□ -0.56
USP31-201ENST00000219689 YME1L1Q96TA2 773 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 ECSITQ9BQ95 431 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 KIAA0232Q92628 1395 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 EIF4G3O43432 1585 aaKnown RBP11.53□□□□□ -0.56
USP31-201ENST00000219689 NOTOA8MTQ0 251 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 AP5Z1O43299 807 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 SLC18A3Q16572 532 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 ZNF57Q68EA5 555 aaPredicted RBP11.53□□□□□ -0.56
USP31-201ENST00000219689 HACE1Q8IYU2 909 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 ROGDIQ9GZN7 287 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 ARMCX1Q9P291 453 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 LOC100506127A0A0U1RQW1 187 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 SNTNA6NMZ2 147 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 TUBA3CQ13748 450 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 COBLL1Q53SF7 1204 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 CRELD2Q6UXH1 353 aaPredicted RBP11.53□□□□□ -0.56
USP31-201ENST00000219689 SETD3Q86TU7 594 aaPredicted RBP11.53□□□□□ -0.56
USP31-201ENST00000219689 PCDH11YQ9BZA8 1340 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 A2MP01023 1474 aa11.53□□□□□ -0.56
USP31-201ENST00000219689 PTGES3LE9PB15 166 aa11.52□□□□□ -0.56
USP31-201ENST00000219689 NAA20P61599 178 aa11.52□□□□□ -0.56
USP31-201ENST00000219689 NAALADL2Q58DX5 795 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms