RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 TMEM47Q9BQJ4 181 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 MYLK2Q9H1R3 596 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 IL1RL2Q9HB29 575 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 GALNT8Q9NY28 637 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 CLIC5Q9NZA1 410 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.91□□□□□ -0.66
VCL-201ENST00000211998 POTECB2RU33 542 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 LIN7AO14910 233 aaPredicted RBP10.91□□□□□ -0.66
VCL-201ENST00000211998 PTDSS1P48651 473 aaKnown RBP10.91□□□□□ -0.66
VCL-201ENST00000211998 RPS6KA3P51812 740 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 STK4Q13043 487 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 MAPK7Q13164 816 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 MAPK6Q16659 721 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 ARMCX4Q5H9R4 360 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 TMEM63BQ5T3F8 832 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 TTC39BQ5VTQ0 682 aaPredicted RBP10.91□□□□□ -0.66
VCL-201ENST00000211998 PLEKHM3Q6ZWE6 761 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 FRMD5Q7Z6J6 570 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 APOBEC3FQ8IUX4 373 aaKnown RBP10.91□□□□□ -0.66
VCL-201ENST00000211998 RMND5BQ96G75 393 aaPredicted RBP10.91□□□□□ -0.66
VCL-201ENST00000211998 ABHD8Q96I13 439 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 RMDN3Q96TC7 470 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 C2orf40Q9H1Z8 148 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 MINPP1Q9UNW1 487 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 SH3GLB1Q9Y371 365 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 IPPQ9Y573 584 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 CDY2AQ9Y6F7 541 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 CDY1Q9Y6F8 540 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 EIF3EP60228 445 aaKnown RBP10.9□□□□□ -0.66
VCL-201ENST00000211998 GRM4Q14833 912 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 HEATR6Q6AI08 1181 aaKnown RBP10.9□□□□□ -0.66
VCL-201ENST00000211998 ISLR2Q6UXK2 745 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 TAS2R42Q7RTR8 314 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 XXYLT1Q8NBI6 393 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 USP33Q8TEY7 942 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 ATXN2LQ8WWM7 1075 aaKnown RBP10.9□□□□□ -0.66
VCL-201ENST00000211998 DNAJC7Q99615 494 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 TEX12Q9BXU0 123 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 SEL1LQ9UBV2 794 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 ZCCHC11Q5TAX3 1644 aaKnown RBP10.9□□□□□ -0.66
VCL-201ENST00000211998 ZNF335Q9H4Z2 1342 aaPredicted RBP10.9□□□□□ -0.66
VCL-201ENST00000211998 FAM153BP0C7A2 387 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 MYBL2P10244 700 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 ETS2P15036 469 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 SERPINB9P50453 376 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 ZNF844Q08AG5 666 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 FAM153CQ494X1 144 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 MEI1Q5TIA1 1274 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 BNIPLQ7Z465 357 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 OR6B3Q8NGW1 331 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 HDAC7Q8WUI4 952 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 TRPC7Q9HCX4 862 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 CD209Q9NNX6 404 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 HSPBP1Q9NZL4 362 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 LMCD1Q9NZU5 365 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 TRIM24O15164 1050 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 PSMG1O95456 288 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 RARGP13631 454 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 VAMP7P51809 220 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 BCAR1P56945 870 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 RGS21Q2M5E4 152 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 ACCSLQ4AC99 568 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 SLC27A3Q5K4L6 730 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 MARK2Q7KZI7 788 aaKnown RBP10.9□□□□□ -0.66
VCL-201ENST00000211998 SNX19Q92543 992 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 AGBL1Q96MI9 1066 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 DEPDC7Q96QD5 511 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 GGA2Q9UJY4 613 aa10.9□□□□□ -0.66
VCL-201ENST00000211998 ABT1Q9ULW3 272 aaKnown RBP10.9□□□□□ -0.66
VCL-201ENST00000211998 CYP27B1O15528 508 aa10.9□□□□□ -0.67
VCL-201ENST00000211998 ADCY6O43306 1168 aa10.9□□□□□ -0.67
VCL-201ENST00000211998 ECE2O60344 883 aa10.9□□□□□ -0.67
VCL-201ENST00000211998 PYGLP06737 847 aa10.9□□□□□ -0.67
VCL-201ENST00000211998 MYL3P08590 195 aa10.9□□□□□ -0.67
VCL-201ENST00000211998 UCHL3P15374 230 aa10.9□□□□□ -0.67
VCL-201ENST00000211998 ATP6V1C1P21283 382 aa10.9□□□□□ -0.67
VCL-201ENST00000211998 COMTP21964 271 aa10.9□□□□□ -0.67
VCL-201ENST00000211998 KCNQ4P56696 695 aa10.9□□□□□ -0.67
VCL-201ENST00000211998 KCNJ2P63252 427 aa10.9□□□□□ -0.67
VCL-201ENST00000211998 HLFQ16534 295 aa10.9□□□□□ -0.67
VCL-201ENST00000211998 P3H2Q8IVL5 708 aa10.9□□□□□ -0.67
VCL-201ENST00000211998 MKNK1Q9BUB5 465 aa10.9□□□□□ -0.67
VCL-201ENST00000211998 SAC3D1A6NKF1 404 aa10.89□□□□□ -0.67
VCL-201ENST00000211998 PPP1R3GB7ZBB8 358 aa10.89□□□□□ -0.67
VCL-201ENST00000211998 C21orf2O43822 256 aa10.89□□□□□ -0.67
VCL-201ENST00000211998 CBX6O95503 412 aa10.89□□□□□ -0.67
VCL-201ENST00000211998 PSMA4P25789 261 aaKnown RBP10.89□□□□□ -0.67
VCL-201ENST00000211998 SOX6P35712 828 aa10.89□□□□□ -0.67
VCL-201ENST00000211998 GCLCP48506 637 aaPredicted RBP10.89□□□□□ -0.67
VCL-201ENST00000211998 MCL1Q07820 350 aa10.89□□□□□ -0.67
VCL-201ENST00000211998 TRADDQ15628 312 aa10.89□□□□□ -0.67
VCL-201ENST00000211998 ZNF618Q5T7W0 954 aa10.89□□□□□ -0.67
VCL-201ENST00000211998 BNC2Q6ZN30 1099 aaPredicted RBP10.89□□□□□ -0.67
VCL-201ENST00000211998 PRUNE1Q86TP1 453 aa10.89□□□□□ -0.67
VCL-201ENST00000211998 TMPRSS6Q8IU80 811 aa10.89□□□□□ -0.67
VCL-201ENST00000211998 TSEN2Q8NCE0 465 aaKnown RBP10.89□□□□□ -0.67
VCL-201ENST00000211998 RIN3Q8TB24 985 aa10.89□□□□□ -0.67
VCL-201ENST00000211998 RRN3Q9NYV6 651 aa10.89□□□□□ -0.67
VCL-201ENST00000211998 BFARQ9NZS9 450 aa10.89□□□□□ -0.67
VCL-201ENST00000211998 ZNF180Q9UJW8 692 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms