RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 ST13P5Q8NFI4 369 aaPredicted RBP17.91■□□□□ 0.46
ITGB4-201ENST00000200181 HEG1Q9ULI3 1381 aa17.91■□□□□ 0.46
ITGB4-201ENST00000200181 MAP3K13O43283 966 aa17.91■□□□□ 0.46
ITGB4-201ENST00000200181 ALDH6A1Q02252 535 aaKnown RBP17.91■□□□□ 0.46
ITGB4-201ENST00000200181 PTK6Q13882 451 aa17.91■□□□□ 0.46
ITGB4-201ENST00000200181 RASGRP2Q7LDG7 609 aa17.91■□□□□ 0.46
ITGB4-201ENST00000200181 SIRT2Q8IXJ6 389 aa17.91■□□□□ 0.46
ITGB4-201ENST00000200181 RSPH1Q8WYR4 309 aa17.91■□□□□ 0.46
ITGB4-201ENST00000200181 IRX2Q9BZI1 471 aaPredicted RBP17.91■□□□□ 0.46
ITGB4-201ENST00000200181 AGAP1Q9UPQ3 857 aa17.91■□□□□ 0.46
ITGB4-201ENST00000200181 SSU72P8A0A1W2PR75 194 aa17.91■□□□□ 0.46
ITGB4-201ENST00000200181 ADRM1Q16186 407 aa17.91■□□□□ 0.46
ITGB4-201ENST00000200181 TMED8Q6PL24 325 aaPredicted RBP17.91■□□□□ 0.46
ITGB4-201ENST00000200181 CCDC149Q6ZUS6 474 aa17.91■□□□□ 0.46
ITGB4-201ENST00000200181 MUC3BQ9H195 1237 aa17.91■□□□□ 0.46
ITGB4-201ENST00000200181 AATKQ6ZMQ8 1374 aa17.91■□□□□ 0.46
ITGB4-201ENST00000200181 TARSP26639 723 aaKnown RBP17.91■□□□□ 0.46
ITGB4-201ENST00000200181 GPSM2P81274 684 aa17.91■□□□□ 0.46
ITGB4-201ENST00000200181 PTGISQ16647 500 aa17.91■□□□□ 0.46
ITGB4-201ENST00000200181 FUT11Q495W5 492 aa17.91■□□□□ 0.46
ITGB4-201ENST00000200181 VPS33BQ9H267 617 aa17.91■□□□□ 0.46
ITGB4-201ENST00000200181 A0A1B0GTH6 734 aa17.91■□□□□ 0.46
ITGB4-201ENST00000200181 HMBSP08397 361 aa17.91■□□□□ 0.46
ITGB4-201ENST00000200181 POU4F1Q01851 419 aa17.91■□□□□ 0.46
ITGB4-201ENST00000200181 KBTBD12Q3ZCT8 623 aa17.91■□□□□ 0.46
ITGB4-201ENST00000200181 RNF149Q8NC42 400 aa17.91■□□□□ 0.46
ITGB4-201ENST00000200181 ITIH6Q6UXX5 1313 aa17.91■□□□□ 0.46
ITGB4-201ENST00000200181 SNTNA6NMZ2 147 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 KIF28PB7ZC32 967 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 SRGNP10124 158 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 RCN1Q15293 331 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.9■□□□□ 0.46
ITGB4-201ENST00000200181 TERB1Q8NA31 727 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 WRNIP1Q96S55 665 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 KRCC1Q9NPI7 259 aaPredicted RBP17.9■□□□□ 0.46
ITGB4-201ENST00000200181 PCDHA10Q9Y5I2 948 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 TMEM191CA6NGB0 347 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 PTPN7P35236 360 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 ARHGEF3Q9NR81 526 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.9■□□□□ 0.46
ITGB4-201ENST00000200181 ZNF513Q8N8E2 541 aaPredicted RBP17.9■□□□□ 0.46
ITGB4-201ENST00000200181 TIPINQ9BVW5 301 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 IGSF1Q8N6C5 1336 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 MZF1P28698 734 aaPredicted RBP17.9■□□□□ 0.46
ITGB4-201ENST00000200181 GEMIN4P57678 1058 aaKnown RBP17.9■□□□□ 0.46
ITGB4-201ENST00000200181 PDK1Q15118 436 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 FAM118BQ9BPY3 351 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 ACAD9Q9H845 621 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 SPASTQ9UBP0 616 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 ZNF608Q9ULD9 1512 aaPredicted RBP17.9■□□□□ 0.46
ITGB4-201ENST00000200181 RHOBTB1O94844 696 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 RBP5P82980 135 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 STX5Q13190 355 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 RBBP8NLQ8NC74 664 aaPredicted RBP17.9■□□□□ 0.46
ITGB4-201ENST00000200181 SLC44A5Q8NCS7 719 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 IPMKQ8NFU5 416 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 PDLIM2Q96JY6 352 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 MTA3Q9BTC8 594 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 KRT84Q9NSB2 600 aa17.9■□□□□ 0.46
ITGB4-201ENST00000200181 TK2O00142 265 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 TPST1O60507 370 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 SEC24CP53992 1094 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 CENPCQ03188 943 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 BARGINQ6ZT62 677 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 C11orf96Q7Z7L8 435 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 THUMPD3Q9BV44 507 aaKnown RBP17.89■□□□□ 0.45
ITGB4-201ENST00000200181 PDZK1P1A8MUH7 402 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 ZNF23P17027 643 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 PRIM2P49643 509 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 NAB2Q15742 525 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 ANKRD49Q8WVL7 239 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 SLC39A10Q9ULF5 831 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 SNX9Q9Y5X1 595 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 FAM196BA6NMK8 535 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 E7ENQ6 273 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 PRDX5P30044 214 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 USP39Q53GS9 565 aaKnown RBP17.89■□□□□ 0.45
ITGB4-201ENST00000200181 METTL16Q86W50 562 aaKnown RBP17.89■□□□□ 0.45
ITGB4-201ENST00000200181 SMARCAL1Q9NZC9 954 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 NDUFA13Q9P0J0 144 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 PIN4Q9Y237 131 aaKnown RBP17.89■□□□□ 0.45
ITGB4-201ENST00000200181 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.89■□□□□ 0.45
ITGB4-201ENST00000200181 EPB42P16452 691 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 PSMC3P17980 439 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 FMO5P49326 533 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 IRAK1P51617 712 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 HIST2H2ACQ16777 129 aaPredicted RBP17.89■□□□□ 0.45
ITGB4-201ENST00000200181 HIST2H2AA3Q6FI13 130 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 SPATA18Q8TC71 538 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 ISCUQ9H1K1 167 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 RPAP3Q9H6T3 665 aaPredicted RBP17.89■□□□□ 0.45
ITGB4-201ENST00000200181 TDRD3Q9H7E2 651 aaKnown RBP17.89■□□□□ 0.45
ITGB4-201ENST00000200181 TRIM10Q9UDY6 481 aa17.89■□□□□ 0.45
ITGB4-201ENST00000200181 EIF3LQ9Y262 564 aaKnown RBP17.89■□□□□ 0.45
ITGB4-201ENST00000200181 AKR1B1P15121 316 aa17.88■□□□□ 0.45
ITGB4-201ENST00000200181 CHRM3P20309 590 aa17.88■□□□□ 0.45
ITGB4-201ENST00000200181 LAMC2Q13753 1193 aa17.88■□□□□ 0.45
ITGB4-201ENST00000200181 ZRANB3Q5FWF4 1079 aa17.88■□□□□ 0.45
ITGB4-201ENST00000200181 MROH9Q5TGP6 573 aa17.88■□□□□ 0.45
ITGB4-201ENST00000200181 SUGP1Q8IWZ8 645 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms