RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 MRRFQ96E11 262 aaKnown RBP13.91□□□□□ -0.18
CTNS-201ENST00000046640 MCEEQ96PE7 176 aa13.91□□□□□ -0.18
CTNS-201ENST00000046640 CDC42EP4Q9H3Q1 356 aaKnown RBP13.91□□□□□ -0.18
CTNS-201ENST00000046640 LRRC19Q9H756 370 aa13.91□□□□□ -0.18
CTNS-201ENST00000046640 TJP2Q9UDY2 1190 aa13.91□□□□□ -0.18
CTNS-201ENST00000046640 SUFUQ9UMX1 484 aa13.91□□□□□ -0.18
CTNS-201ENST00000046640 TRIM33Q9UPN9 1127 aa13.91□□□□□ -0.18
CTNS-201ENST00000046640 ARID2Q68CP9 1835 aa13.91□□□□□ -0.18
CTNS-201ENST00000046640 LTBP3Q9NS15 1303 aa13.91□□□□□ -0.18
CTNS-201ENST00000046640 GOLGA8SH3BPF8 625 aa13.91□□□□□ -0.18
CTNS-201ENST00000046640 TP73O15350 636 aa13.91□□□□□ -0.18
CTNS-201ENST00000046640 ATP6V1G2O95670 118 aa13.91□□□□□ -0.18
CTNS-201ENST00000046640 CDC25CP30307 473 aa13.91□□□□□ -0.18
CTNS-201ENST00000046640 ITGA8P53708 1063 aa13.91□□□□□ -0.18
CTNS-201ENST00000046640 CDH8P55286 799 aa13.91□□□□□ -0.18
CTNS-201ENST00000046640 MCCD1P59942 119 aaPredicted RBP13.91□□□□□ -0.18
CTNS-201ENST00000046640 TRPC3Q13507 836 aa13.91□□□□□ -0.18
CTNS-201ENST00000046640 CYP1B1Q16678 543 aa13.91□□□□□ -0.18
CTNS-201ENST00000046640 NOL9Q5SY16 702 aaKnown RBP13.91□□□□□ -0.18
CTNS-201ENST00000046640 ARMC9Q7Z3E5 817 aa13.91□□□□□ -0.18
CTNS-201ENST00000046640 TAB3Q8N5C8 712 aaPredicted RBP13.91□□□□□ -0.18
CTNS-201ENST00000046640 C3orf20Q8ND61 904 aa13.91□□□□□ -0.18
CTNS-201ENST00000046640 ARHGEF2Q92974 986 aaKnown RBP13.91□□□□□ -0.18
CTNS-201ENST00000046640 STAMBPL1Q96FJ0 436 aa13.91□□□□□ -0.18
CTNS-201ENST00000046640 PGM2Q96G03 612 aa13.91□□□□□ -0.18
CTNS-201ENST00000046640 CISHQ9NSE2 258 aa13.91□□□□□ -0.18
CTNS-201ENST00000046640 DONSONQ9NYP3 566 aa13.91□□□□□ -0.18
CTNS-201ENST00000046640 POLIQ9UNA4 740 aa13.91□□□□□ -0.18
CTNS-201ENST00000046640 TMEM120BA0PK00 339 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 A8MUI8 341 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 POTEJP0CG39 1038 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 CD19P15391 556 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 XRCC4Q13426 336 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 CNGA2Q16280 664 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 MAPK6Q16659 721 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 LACTB2Q53H82 288 aaPredicted RBP13.9□□□□□ -0.18
CTNS-201ENST00000046640 EEF1DP3Q658K8 133 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 PPP1R13LQ8WUF5 828 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 TFAP2BQ92481 460 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 MRPL4Q9BYD3 311 aaKnown RBP13.9□□□□□ -0.18
CTNS-201ENST00000046640 DCLK3Q9C098 648 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 MINDY3Q9H8M7 445 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 MCM8Q9UJA3 840 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 EIF4E1BA6NMX2 242 aaKnown RBP13.9□□□□□ -0.18
CTNS-201ENST00000046640 TOM1L1O75674 476 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 AGTP01019 485 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 ZSCAN5DPP0CG00 497 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 GBP2P32456 591 aaPredicted RBP13.9□□□□□ -0.18
CTNS-201ENST00000046640 ELF1P32519 619 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 RFC5P40937 340 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 GPAT2Q6NUI2 795 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 DCUN1D2Q6PH85 259 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 GLIS1Q8NBF1 620 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 GPR20Q99678 358 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 OSBPL8Q9BZF1 889 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 C10orf88Q9H8K7 445 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 AVENQ9NQS1 362 aaPredicted RBP13.9□□□□□ -0.18
CTNS-201ENST00000046640 AAASQ9NRG9 546 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 PNMA3Q9UL41 463 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 LCTP09848 1927 aa13.9□□□□□ -0.18
CTNS-201ENST00000046640 ETS1P14921 441 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 MKRN3Q13064 507 aaKnown RBP13.89□□□□□ -0.19
CTNS-201ENST00000046640 MTM1Q13496 603 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 ZNF568Q3ZCX4 644 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 CAPN12Q6ZSI9 719 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 PIGWQ7Z7B1 504 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 ZNF677Q86XU0 584 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 RHOT1Q8IXI2 618 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.89□□□□□ -0.19
CTNS-201ENST00000046640 ACO2Q99798 780 aaKnown RBP13.89□□□□□ -0.19
CTNS-201ENST00000046640 SGIP1Q9BQI5 828 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 TACO1Q9BSH4 297 aaKnown RBP13.89□□□□□ -0.19
CTNS-201ENST00000046640 SAE1Q9UBE0 346 aaPredicted RBP13.89□□□□□ -0.19
CTNS-201ENST00000046640 DNAH12Q6ZR08 3092 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 ZBTB42B2RXF5 422 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 PIK3R2O00459 728 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 PIGRP01833 764 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 TMEM191BP0C7N4 346 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 CXCL8P10145 99 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 OGDHQ02218 1023 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 MYO1EQ12965 1108 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 BRSK2Q8IWQ3 736 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 CENPTQ96BT3 561 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 C9orf72Q96LT7 481 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 RNPEPQ9H4A4 650 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 RBPJLQ9UBG7 517 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 PARP2Q9UGN5 583 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 IVNS1ABPQ9Y6Y0 642 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 SOCS7O14512 581 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 CNMDO75829 334 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 DNAJC8O75937 253 aaPredicted RBP13.89□□□□□ -0.19
CTNS-201ENST00000046640 ASS1P00966 412 aaKnown RBP13.89□□□□□ -0.19
CTNS-201ENST00000046640 IQCF3P0C7M6 154 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 MYBL1P10243 752 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 TXNP10599 105 aaKnown RBP13.89□□□□□ -0.19
CTNS-201ENST00000046640 RARGP13631 454 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 ATF2P15336 505 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 EDNRBP24530 442 aa13.89□□□□□ -0.19
CTNS-201ENST00000046640 CLNS1AP54105 237 aaKnown RBP13.89□□□□□ -0.19
CTNS-201ENST00000046640 DYNLT1P63172 113 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms