RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 TMOD2Q9NZR1 351 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 EME2A4GXA9 379 aaPredicted RBP14.81□□□□□ -0.04
USH1C-201ENST00000005226 SGK1O00141 431 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 CHRM1P11229 460 aaPredicted RBP14.81□□□□□ -0.04
USH1C-201ENST00000005226 ZNF252P-AS1Q0IIN9 211 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 PTP4A2Q12974 167 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 SWSAP1Q6NVH7 229 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 NLRP9Q7RTR0 991 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 CCDC125Q86Z20 511 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 FEZF2Q8TBJ5 459 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 RMDN3Q96TC7 470 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 HAPLN2Q9GZV7 340 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 TBC1D22BQ9NU19 505 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 CYP39A1Q9NYL5 469 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 KANSL3Q9P2N6 904 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 SLC17A7Q9P2U7 560 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 PCK1P35558 622 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 TUBP50607 506 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 SNRPFP62306 86 aaKnown RBP14.8□□□□□ -0.04
USH1C-201ENST00000005226 BLMHQ13867 455 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 C15orf39Q6ZRI6 1047 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 RELL1Q8IUW5 271 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 AGGF1Q8N302 714 aaeCLIP14.8□□□□□ -0.04
USH1C-201ENST00000005226 RBBP8NLQ8NC74 664 aaPredicted RBP14.8□□□□□ -0.04
USH1C-201ENST00000005226 STK32AQ8WU08 396 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 OSBPL1AQ9BXW6 950 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 ZFP69BQ9UJL9 534 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 NUB1Q9Y5A7 615 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 LRRD1A4D1F6 860 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 SPDYE2BA6NHP3 402 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 WDR64B1ANS9 1081 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 PRPF4O43172 522 aaKnown RBP eCLIP14.8□□□□□ -0.04
USH1C-201ENST00000005226 TYROBPO43914 113 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 C4BPAP04003 597 aaKnown RBP14.8□□□□□ -0.04
USH1C-201ENST00000005226 ABHD2P08910 425 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 LINGO3P0C6S8 592 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 SPDYE6P0CI01 402 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 ALDH3A1P30838 453 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 ERFP50548 548 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 PARP6Q2NL67 630 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 FNBP1LQ5T0N5 605 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 PLEKHA7Q6IQ23 1121 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 NLGN1Q8N2Q7 840 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 ALLCQ8N6M5 410 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 OR5B17Q8NGF7 314 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 MCEEQ96PE7 176 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 MIPEPQ99797 713 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 XPNPEP1Q9NQW7 623 aa14.8□□□□□ -0.04
USH1C-201ENST00000005226 A0A0G2JND7 137 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 CLUHO75153 1309 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 GTF2H1P32780 548 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 LIG4P49917 911 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 GDF10P55107 478 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 CUL2Q13617 745 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 SMTNL2Q2TAL5 461 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 ZACNQ401N2 412 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 KHDC1Q4VXA5 237 aaKnown RBP14.79□□□□□ -0.04
USH1C-201ENST00000005226 ANO7Q6IWH7 933 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 LRRC6Q86X45 466 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 PTPRN2Q92932 1015 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 TMEM143Q96AN5 459 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 TRIM11Q96F44 468 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 CNTNAP1P78357 1384 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 TCRBV7S3A2A0A539 114 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 CFAP69A5D8W1 941 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 ALOX15BO15296 676 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 MAP3K13O43283 966 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 PTDSS1P48651 473 aaKnown RBP14.79□□□□□ -0.04
USH1C-201ENST00000005226 EAPPQ56P03 285 aaPredicted RBP14.79□□□□□ -0.04
USH1C-201ENST00000005226 KCNT1Q5JUK3 1230 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 RNASEH2BQ5TBB1 312 aaKnown RBP14.79□□□□□ -0.04
USH1C-201ENST00000005226 CYP4A22Q5TCH4 519 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 DSTYKQ6XUX3 929 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 SPOCD1Q6ZMY3 1216 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 ENOSF1Q7L5Y1 443 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 FAM151AQ8WW52 585 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 SENP7Q9BQF6 1050 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 MRPL47Q9HD33 250 aaKnown RBP14.79□□□□□ -0.04
USH1C-201ENST00000005226 METTL5Q9NRN9 209 aaKnown RBP14.79□□□□□ -0.04
USH1C-201ENST00000005226 ANKEF1Q9NU02 776 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 SEPT9Q9UHD8 586 aaPredicted RBP14.79□□□□□ -0.04
USH1C-201ENST00000005226 DPPA5A6NC42 116 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 DCTN3O75935 186 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 FKBP1AP62942 108 aaKnown RBP14.79□□□□□ -0.04
USH1C-201ENST00000005226 RFX8Q6ZV50 586 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 APBB1IPQ7Z5R6 666 aaPredicted RBP14.79□□□□□ -0.04
USH1C-201ENST00000005226 RIBC1Q8N443 379 aaPredicted RBP14.79□□□□□ -0.04
USH1C-201ENST00000005226 TCP10LQ8TDR4 215 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 WNK4Q96J92 1243 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 POLR3FQ9H1D9 316 aaPredicted RBP14.79□□□□□ -0.04
USH1C-201ENST00000005226 ARL8BQ9NVJ2 186 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 ANKFY1Q9P2R3 1169 aa14.79□□□□□ -0.04
USH1C-201ENST00000005226 WFS1O76024 890 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 GLRA2P23416 452 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 CCNG1P51959 295 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 NR1H3Q13133 447 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 DLGAP5Q15398 846 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 MTERF2Q49AM1 385 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 SLC27A3Q5K4L6 730 aa14.78□□□□□ -0.04
USH1C-201ENST00000005226 ARHGEF16Q5VV41 709 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms