RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Spata6lB2RV46 347 aa9.71□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Eddm13E9Q7F5 164 aa9.71□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Adam7O35227 789 aa9.71□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Psmc5P62196 406 aa9.71□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Rps8P62242 208 aaKnown RBP9.71□□□□□ -0.85
Col6a5-201ENSMUST00000165165 ZbbxQ0P5X5 716 aa9.71□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Sv2cQ69ZS6 727 aa9.71□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Olfr301Q7TS04 311 aa9.71□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Lsm14aQ8K2F8 462 aaKnown RBP9.71□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Eif3lQ8QZY1 564 aaKnown RBP9.71□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Clptm1Q8VBZ3 664 aa9.71□□□□□ -0.85
Col6a5-201ENSMUST00000165165 2310003L06RikQ9CV82 495 aa9.71□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Drap1Q9D6N5 205 aa9.71□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Cnga3Q9JJZ8 631 aa9.71□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Hs6st1Q9QYK5 411 aa9.71□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Samd9lQ69Z37 1561 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Srsf11E9Q6E5 511 aaKnown RBP9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 F830016B08RikG3UWE2 416 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 E230025N22RikG5E8S3 482 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Serpinh1P19324 417 aaKnown RBP9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ccnd1P25322 295 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Lrrc8bQ5DU41 803 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ces3aQ63880 571 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Brsk2Q69Z98 735 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Cpa1Q7TPZ8 419 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Q8C5C9 218 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Scrn2Q8VCA8 425 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ces3bQ8VCU1 571 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Nacc2Q9DCM7 586 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 1700016G14RikA0A286YCZ6 238 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 EpoP07321 192 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Cyp17a1P27786 507 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Eya1P97767 591 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Prkaa1Q5EG47 559 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Chi3l1Q61362 389 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Rbl2Q64700 1135 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Olfml2aQ8BHP7 681 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Dync1li1Q8R1Q8 523 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ces1Q8VCC2 565 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Nmd3Q99L48 503 aaKnown RBP9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 PtgdrP70263 357 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 CamkvQ3UHL1 512 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Glra4Q61603 456 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Phf24Q80TL4 400 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Rmnd5aQ80YQ8 391 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Fbxo44Q8BK26 255 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ndufs3Q9DCT2 263 aaKnown RBP9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gpr63Q9EQQ3 425 aa9.71□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Tlx1P43345 332 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Jak1P52332 1153 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 GypcQ78HU7 95 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Fbxw7Q8VBV4 629 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Pcdhb15Q91Y04 786 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Rmnd5bQ91YQ7 393 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ap4s1Q9WVL1 144 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Kank3Q9Z1P7 791 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 MntO08789 591 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Rab2aP53994 212 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Sdr16c6Q05A13 316 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Hesx1Q61658 185 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Rell1Q8K2J7 272 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 HpgdQ8VCC1 269 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Pcdhb21Q91V48 774 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Spef1Q99JL1 234 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Mrpl4Q9DCU6 294 aaKnown RBP9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Mup6A2AV72 179 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Hspa1bP17879 642 aaKnown RBP9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Pou2f3P31362 431 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Znf513Q6PD29 541 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Pum3Q8BKS9 647 aaKnown RBP9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Prr33Q8C494 260 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Mta3Q924K8 591 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 MtpapQ9D0D3 585 aaKnown RBP9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Batf3Q9D275 118 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Efhd2Q9D8Y0 240 aaKnown RBP9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Anxa9Q9JHQ0 345 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Wdr12Q9JJA4 423 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Nr1h3Q9Z0Y9 445 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Scgb2b11A0A087WR49 112 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gm13023A2A8N2 498 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 A930018M24RikB7ZMY3 218 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Bub1O08901 1058 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 PltpP55065 493 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 StamP70297 548 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Tbx1P70323 479 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Itga1Q3V3R4 1179 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Tmem270Q6UJB9 264 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Haus7Q8BKT8 364 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Arhgap28Q8BN58 729 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Nox1Q8CIZ9 591 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Dmrtc1Q9D9R7 182 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 GabrqQ9JLF1 638 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Actl7aQ9QY84 440 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 CcniQ9Z2V9 377 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 4921501E09RikA0A0R4J054 908 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Vmn2r4K7N784 913 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Tm6sf1P58749 370 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Sec31aQ3UPL0 1230 aaKnown RBP9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gemin4Q6P6L6 1058 aaKnown RBP9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Catsper4Q8BVN3 442 aa9.7□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 45 ms