RNA–Protein interactions for RNA: ENSMUST00000131537.8

Lig3-204, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-204ENSMUST00000131537 Fbxl21Q8BFZ4 434 aa21.21■□□□□ 0.99
Lig3-204ENSMUST00000131537 Ostm1Q8BGT0 338 aa21.21■□□□□ 0.99
Lig3-204ENSMUST00000131537 Pum3Q8BKS9 647 aaKnown RBP21.21■□□□□ 0.99
Lig3-204ENSMUST00000131537 Fam151aQ8QZW3 608 aa21.21■□□□□ 0.99
Lig3-204ENSMUST00000131537 Tmem161aQ8VCA6 480 aa21.21■□□□□ 0.99
Lig3-204ENSMUST00000131537 Ccdc71Q8VEG0 433 aa21.21■□□□□ 0.99
Lig3-204ENSMUST00000131537 Q91Z58 1206 aa21.21■□□□□ 0.99
Lig3-204ENSMUST00000131537 Tlcd1Q99JT6 247 aa21.21■□□□□ 0.99
Lig3-204ENSMUST00000131537 Rab11fip1Q9D620 645 aa21.21■□□□□ 0.99
Lig3-204ENSMUST00000131537 PcntP48725 2898 aa21.21■□□□□ 0.99
Lig3-204ENSMUST00000131537 Fam209A2APA5 170 aa21.2■□□□□ 0.99
Lig3-204ENSMUST00000131537 4930402K13RikB1AW18 415 aa21.2■□□□□ 0.99
Lig3-204ENSMUST00000131537 Muc3aQ3U5A2 218 aa21.2■□□□□ 0.99
Lig3-204ENSMUST00000131537 SkiQ60698 725 aa21.2■□□□□ 0.99
Lig3-204ENSMUST00000131537 PostnQ62009 838 aa21.2■□□□□ 0.99
Lig3-204ENSMUST00000131537 Oca2Q62052 833 aa21.2■□□□□ 0.99
Lig3-204ENSMUST00000131537 Oxsr1Q6P9R2 527 aa21.2■□□□□ 0.99
Lig3-204ENSMUST00000131537 Slc20a2Q80UP8 656 aa21.2■□□□□ 0.99
Lig3-204ENSMUST00000131537 Epn1Q80VP1 575 aa21.2■□□□□ 0.99
Lig3-204ENSMUST00000131537 Depdc1bQ8BH88 529 aa21.2■□□□□ 0.99
Lig3-204ENSMUST00000131537 Fam163bQ8BUM6 167 aa21.2■□□□□ 0.99
Lig3-204ENSMUST00000131537 Syn3Q8JZP2 579 aa21.2■□□□□ 0.99
Lig3-204ENSMUST00000131537 Rbm12Q8R4X3 992 aaKnown RBP21.2■□□□□ 0.99
Lig3-204ENSMUST00000131537 4933402E13RikQ9D4D2 429 aa21.2■□□□□ 0.99
Lig3-204ENSMUST00000131537 Egfl6Q9JJZ5 550 aa21.2■□□□□ 0.99
Lig3-204ENSMUST00000131537 Adam22Q9R1V6 904 aa21.2■□□□□ 0.99
Lig3-204ENSMUST00000131537 Gm28036V9GXJ1 658 aa21.2■□□□□ 0.99
Lig3-204ENSMUST00000131537 Gm27029A2A4P4 543 aa21.2■□□□□ 0.98
Lig3-204ENSMUST00000131537 Vti1aO89116 217 aa21.2■□□□□ 0.98
Lig3-204ENSMUST00000131537 Ccl5P30882 91 aa21.2■□□□□ 0.98
Lig3-204ENSMUST00000131537 Ctnnd1P30999 938 aaKnown RBP21.2■□□□□ 0.98
Lig3-204ENSMUST00000131537 Slc26a1P58735 704 aa21.2■□□□□ 0.98
Lig3-204ENSMUST00000131537 Chp1P61022 195 aa21.2■□□□□ 0.98
Lig3-204ENSMUST00000131537 Psmc1P62192 440 aa21.2■□□□□ 0.98
Lig3-204ENSMUST00000131537 Cpne7Q0VE82 557 aa21.2■□□□□ 0.98
Lig3-204ENSMUST00000131537 Nlrc4Q3UP24 1024 aa21.2■□□□□ 0.98
Lig3-204ENSMUST00000131537 NntQ61941 1086 aaKnown RBP21.2■□□□□ 0.98
Lig3-204ENSMUST00000131537 Papd5Q68ED3 633 aaKnown RBP21.2■□□□□ 0.98
Lig3-204ENSMUST00000131537 Gpsm1Q6IR34 673 aa21.2■□□□□ 0.98
Lig3-204ENSMUST00000131537 MylipQ8BM54 445 aa21.2■□□□□ 0.98
Lig3-204ENSMUST00000131537 Pcdhb19Q91Y01 801 aa21.2■□□□□ 0.98
Lig3-204ENSMUST00000131537 Rxfp2Q91ZZ5 737 aa21.2■□□□□ 0.98
Lig3-204ENSMUST00000131537 Tmem132aQ922P8 1018 aa21.2■□□□□ 0.98
Lig3-204ENSMUST00000131537 Rnf14Q9JI90 485 aa21.2■□□□□ 0.98
Lig3-204ENSMUST00000131537 Trim10Q9WUH5 489 aa21.2■□□□□ 0.98
Lig3-204ENSMUST00000131537 Vstm4T1NXB5 319 aa21.2■□□□□ 0.98
Lig3-204ENSMUST00000131537 Top6blJ3QMY9 579 aa21.19■□□□□ 0.98
Lig3-204ENSMUST00000131537 Capn2O08529 700 aa21.19■□□□□ 0.98
Lig3-204ENSMUST00000131537 P01878 344 aa21.19■□□□□ 0.98
Lig3-204ENSMUST00000131537 EzrP26040 586 aaKnown RBP21.19■□□□□ 0.98
Lig3-204ENSMUST00000131537 Ephb3P54754 993 aaKnown RBP21.19■□□□□ 0.98
Lig3-204ENSMUST00000131537 Lrch2Q3UMG5 773 aa21.19■□□□□ 0.98
Lig3-204ENSMUST00000131537 Lrig2Q52KR2 1054 aa21.19■□□□□ 0.98
Lig3-204ENSMUST00000131537 Sorbs1Q62417 1290 aa21.19■□□□□ 0.98
Lig3-204ENSMUST00000131537 Atg9bQ6EBV9 922 aa21.19■□□□□ 0.98
Lig3-204ENSMUST00000131537 NrcamQ810U4 1256 aa21.19■□□□□ 0.98
Lig3-204ENSMUST00000131537 Tmem209Q8BRG8 561 aaKnown RBP21.19■□□□□ 0.98
Lig3-204ENSMUST00000131537 FgbQ8K0E8 481 aa21.19■□□□□ 0.98
Lig3-204ENSMUST00000131537 Znf830Q8R1N0 363 aaKnown RBP21.19■□□□□ 0.98
Lig3-204ENSMUST00000131537 Sertad2Q9JJG5 309 aa21.19■□□□□ 0.98
Lig3-204ENSMUST00000131537 GabrqQ9JLF1 638 aa21.19■□□□□ 0.98
Lig3-204ENSMUST00000131537 Irs2P81122 1321 aa21.19■□□□□ 0.98
Lig3-204ENSMUST00000131537 Oaz2O08608 189 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 ByslO54825 436 aaKnown RBP21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Kcnj6P48542 425 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 NrlP54846 237 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Uchl4P58321 233 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 L1td1Q587J6 782 aaKnown RBP21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Slc20a1Q61609 681 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Tbc1d12Q6A039 696 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Nod1Q8BHB0 953 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Rab30Q923S9 203 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Gtf3c6Q9D8P7 227 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Clec1bQ9JL99 229 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Pdzd4Q9QY39 772 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Dnah12Q3V0Q1 3086 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Hnrnph3D3Z3N4 346 aaKnown RBP21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Gm10110D3Z5M2 615 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Spata31d1dE9Q5W2 1247 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 GmnnO88513 206 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 P01650 108 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 P01653 108 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Camk4P08414 469 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Bach2P97303 839 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 IhhP97812 411 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Rmdn3Q3UJU9 470 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Pabpc4Q6PHQ9 660 aaKnown RBP21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Dclk3Q8BWQ5 790 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Fam49bQ921M7 324 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Mrpl2Q9D773 306 aaKnown RBP21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Oxct2bQ9ESL0 520 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Oxct2aQ9JJN4 520 aa21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 Cdc42ep4Q9JM96 349 aaKnown RBP21.18■□□□□ 0.98
Lig3-204ENSMUST00000131537 March10E9PX79 788 aa21.17■□□□□ 0.98
Lig3-204ENSMUST00000131537 Cetn1P41209 172 aa21.17■□□□□ 0.98
Lig3-204ENSMUST00000131537 PkmP52480 531 aaKnown RBP21.17■□□□□ 0.98
Lig3-204ENSMUST00000131537 Arpp19P56212 112 aaKnown RBP21.17■□□□□ 0.98
Lig3-204ENSMUST00000131537 Rad54lP70270 747 aa21.17■□□□□ 0.98
Lig3-204ENSMUST00000131537 Rnf113a2Q14B01 337 aa21.17■□□□□ 0.98
Lig3-204ENSMUST00000131537 Ppp1r12cQ3UMT1 782 aa21.17■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 73.3 ms