RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Wscd1Q80XH4 572 aa13.21□□□□□ -0.3
Trim50-202ENSMUST00000111180 Pnma2Q8BHK0 365 aa13.21□□□□□ -0.3
Trim50-202ENSMUST00000111180 Il33Q8BVZ5 266 aa13.21□□□□□ -0.3
Trim50-202ENSMUST00000111180 DarsQ922B2 501 aaKnown RBP13.21□□□□□ -0.3
Trim50-202ENSMUST00000111180 1700123K08RikQ9D991 295 aa13.21□□□□□ -0.3
Trim50-202ENSMUST00000111180 Nup50Q9JIH2 466 aaKnown RBP13.21□□□□□ -0.3
Trim50-202ENSMUST00000111180 Egfl7Q9QXT5 275 aa13.21□□□□□ -0.3
Trim50-202ENSMUST00000111180 Bcl11aQ9QYE3 773 aa13.21□□□□□ -0.3
Trim50-202ENSMUST00000111180 Gadd45gQ9Z111 159 aa13.21□□□□□ -0.3
Trim50-202ENSMUST00000111180 Slc4a11A2AJN7 862 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Pex10B1AUE5 324 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Gm4297D3YWB7 211 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 TnfP06804 235 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 H2afzP0C0S6 128 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Ptgs1P22437 602 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Xrcc5P27641 732 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Rad54lP70270 747 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 H2afvQ3THW5 128 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Fam92bQ3V2J0 292 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Mxd4Q60948 209 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Cyp3a16Q64481 504 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Atp11bQ6DFW5 1175 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Kcnt1Q6ZPR4 1224 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Slc20a2Q80UP8 656 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Spata20Q80YT5 790 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Tor4aQ8BH02 426 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Aste1Q8BIR2 672 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 PdhxQ8BKZ9 501 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Ints6lQ8BND4 861 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Maats1Q8BRC6 783 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Gpc5Q8CAL5 572 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Unc45bQ8CGY6 931 aaKnown RBP13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Rbm12Q8R4X3 992 aaKnown RBP13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Olfr385Q8VGT1 312 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Asb11Q9CQ31 323 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Lman1Q9D0F3 517 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Slamf8Q9D3G2 278 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Ppp2r3cQ9JK24 453 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Uchl3Q9JKB1 230 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Eif2ak3Q9Z2B5 1114 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Gm28036V9GXJ1 658 aa13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Baz2aQ91YE5 1889 aaKnown RBP13.2□□□□□ -0.3
Trim50-202ENSMUST00000111180 Cntnap4Q99P47 1310 aa13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 Gm4846B2RWH8 538 aa13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 NcapgE9PWG6 1004 aa13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 Abcb1bP06795 1276 aa13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 PrphP15331 475 aa13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 Ms4a1P19437 291 aa13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 Dpep1P31428 410 aa13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 Polr2fP61219 127 aa13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 BC051142Q3V0M8 400 aa13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 Mapk6Q61532 720 aa13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 TfrcQ62351 763 aaKnown RBP13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 Mysm1Q69Z66 819 aa13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 Atg9bQ6EBV9 922 aa13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 Proser3Q7TSA6 634 aa13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 Reps2Q80XA6 521 aa13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 KyQ8C8H8 661 aa13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 Pak2Q8CIN4 524 aa13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 Olfr30Q8VGD8 315 aa13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 Chst12Q99LL3 419 aa13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 Cldnd1Q9CQX5 253 aa13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 Ctnnbl1Q9CWL8 563 aaKnown RBP13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 Fbxo17Q9QZM8 286 aa13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 Peg12Q9WVA7 283 aa13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 Znf394Q9Z1D9 521 aa13.19□□□□□ -0.3
Trim50-202ENSMUST00000111180 Zfp358E9Q8M1 571 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 Gm1758F6VZZ1 202 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 AlbP07724 608 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 Sh3bp2Q06649 559 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 Ptcd3Q14C51 685 aaKnown RBP13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 Ppp4r3cQ3V0Y1 813 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 MmeQ61391 750 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 Sin3bQ62141 1098 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 Tmem151bQ68FE7 561 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 Ctdp1Q7TSG2 960 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 MogsQ80UM7 834 aaKnown RBP13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 Cyth4Q80YW0 393 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 Znf473Q8BI67 892 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 Snip1Q8BIZ6 383 aaKnown RBP13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 PolrmtQ8BKF1 1207 aaKnown RBP13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 Efl1Q8C0D5 1127 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 Commd10Q8JZY2 202 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 Gga1Q8R0H9 635 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 Sdcbp2Q99JZ0 292 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 Fuca2Q99KR8 461 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 Them5Q9CQJ0 248 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 Dbndd2Q9CRD4 158 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 Noxred1Q9D3S5 366 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 Spatc1lQ9D9W0 342 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 Scyl3Q9DBQ7 735 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 Rnf14Q9JI90 485 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 CtsfQ9R013 462 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 TriobpQ99KW3 2014 aa13.18□□□□□ -0.3
Trim50-202ENSMUST00000111180 Gm4756A0A140LIS8 335 aa13.17□□□□□ -0.3
Trim50-202ENSMUST00000111180 Grik3B1AS29 919 aa13.17□□□□□ -0.3
Trim50-202ENSMUST00000111180 Abcb5B5X0E4 1255 aa13.17□□□□□ -0.3
Trim50-202ENSMUST00000111180 2010300C02RikE9Q3M9 1175 aa13.17□□□□□ -0.3
Trim50-202ENSMUST00000111180 Spata31d1dE9Q5W2 1247 aa13.17□□□□□ -0.3
Trim50-202ENSMUST00000111180 Mroh4G3X8W1 983 aa13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms