RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Sar1aP36536 198 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 PklrP53657 574 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Rab6bP61294 208 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Prom2Q3UUY6 835 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Myl6Q60605 151 aaKnown RBP10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Msantd2Q6NZR2 559 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Tcaf1Q8BNE1 924 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Ccdc68Q8BVC4 333 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Dus1lQ8C2P3 475 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Dclre1bQ8C7W7 541 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Uba3Q8C878 462 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Sec63Q8VHE0 760 aaKnown RBP10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 IvdQ9JHI5 424 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 HnrnpcQ9Z204 313 aaKnown RBP10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Chd5A2A8L1 1946 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 SfnO70456 248 aaKnown RBP10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 RcvrnP34057 202 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 PorP37040 678 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 VegfaQ00731 214 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Atxn7l3bQ3UD01 97 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Ubn1Q4G0F8 1135 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Gm11437Q5QR91 290 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Plk4Q64702 925 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Srd5a1Q68FF9 255 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Nudt16Q6P3D0 195 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Trim35Q8C006 501 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Ephb1Q8CBF3 984 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Stard7Q8R1R3 373 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Caskin2Q8VHK1 1201 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Psmd9Q9CR00 222 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Sapcd2Q9D818 391 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Plod1Q9R0E2 728 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Cntnap5cQ0V8T7 1305 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Zscan4-ps1A0A1C7CYV3 506 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Zscan4dA7KBS4 506 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Zfp457L7N1X4 647 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Pitpnm1O35954 1243 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Tlk2O55047 718 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Bcat1P24288 386 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 AdssP46664 456 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Gtf2bP62915 316 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Ptprn2P80560 1001 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 GabpaQ00422 454 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Ddr1Q03146 911 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Zscan4fQ3URS2 506 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Spdye4aQ5IBH6 268 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Luc7l3Q5SUF2 432 aaKnown RBP10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 CyldQ80TQ2 952 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Zscan4cQ80VJ6 506 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Spata21Q8BHW6 681 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Znf879Q8BI99 563 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Kcns3Q8BQZ8 491 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 EtnpplQ8BWU8 499 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Tmem161bQ8C2L6 487 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Trip10Q8CJ53 603 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Dtnbp1Q91WZ8 352 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Gbp7Q91Z40 638 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Foxp3Q99JB6 429 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Nt5c3aQ9D020 331 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 ParvaQ9EPC1 372 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Dach1Q9QYB2 751 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Plcg1Q62077 1302 aa10.22□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Ripor3A1L3T7 938 aa10.21□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Ccdc175E9PVB3 822 aa10.21□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 GclmO09172 274 aaKnown RBP10.21□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 L1camP11627 1260 aa10.21□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 GcP21614 476 aa10.21□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Drp2Q05AA6 957 aa10.21□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Ttc39dQ0VF76 604 aa10.21□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Oog3Q3UWY1 500 aa10.21□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Sh3rf1Q69ZI1 892 aa10.21□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Ttyh3Q6P5F7 524 aa10.21□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 CcnyQ8BGU5 341 aa10.21□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Pex19Q8VCI5 299 aa10.21□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Terb2Q9D494 218 aa10.21□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 XdhQ00519 1335 aa10.21□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 FscbA1EGX6 1074 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 RarbP22605 482 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ndufs6P52503 116 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Cdh8P97291 799 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ppm1jQ149T7 507 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ppp4r3cQ3V0Y1 813 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Acvrl1Q61288 502 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 HpseQ6YGZ1 535 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Nsun6Q7TS68 476 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Chn2Q80XD1 332 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Lyve1Q8BHC0 318 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 BrdtQ91Y44 956 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Maged2Q9ER67 616 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Nup50Q9JIH2 466 aaKnown RBP10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 XkQ9QXY7 446 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Krt27Q9Z320 448 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Klhl41A2AUC9 606 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Lipo2D3YY49 398 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 NyxP83503 476 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Epas1P97481 874 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ccdc138Q0VF22 680 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Tdrd5Q5VCS6 1040 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Sv2cQ69ZS6 727 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 E2f7Q6S7F2 904 aa10.21□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms