RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Acvrl1Q61288 502 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Tfap2bQ61313 459 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Oca2Q62052 833 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Papd5Q68ED3 633 aaKnown RBP9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Rapgefl1Q68EF8 662 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Jade3Q6IE82 823 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Tspan18Q80WR1 248 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 GopcQ8BH60 463 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Myef2Q8C854 591 aaKnown RBP9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gtpbp10Q8K013 366 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Btbd6Q8K2J9 488 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Spns2Q91VM4 549 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Slamf8Q9D3G2 278 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Cul2Q9D4H8 745 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 MicalclQ9D5U9 680 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Foxe3Q9QY14 288 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gm45713A0A1B0GS68 446 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gm8369E9PZI3 166 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 BhmtO35490 407 aaKnown RBP9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 ChkbO55229 394 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Cyp2b9P12790 491 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ap1m1P35585 423 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Sesn2P58043 480 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Zscan2Q07230 614 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Atg9bQ6EBV9 922 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Zfyve28Q6ZPK7 905 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 FtoQ8BGW1 502 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Zdhhc3Q8R173 299 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Nup58Q8R332 587 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Dnajc28Q8VCE1 385 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Bbs5Q9CZQ9 341 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ubxn11Q9D572 484 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 DcpsQ9DAR7 338 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Slc26a3Q9WVC8 757 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Rasgrp1Q9Z1S3 795 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ms4a14A0A087WSD2 1232 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Fbf1A2A870 1173 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Znf804aA2AKY4 1200 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Fam71aB7XG49 585 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gm281D3Z1Y0 860 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Rdh7O88451 316 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Tagap1P0CAX8 505 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Tcp1P11983 556 aaKnown RBP9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Rpl7aP12970 266 aaKnown RBP9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 FechP22315 420 aaKnown RBP9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ppm1aP49443 382 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 SftpdP50404 374 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 B3gat3P58158 335 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Cd163Q2VLH6 1121 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Smcr8Q3UMB5 935 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Cracr2aQ3UP38 310 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Stip1Q60864 543 aaKnown RBP9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Vps72Q62481 368 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Fgfr1opQ66JX5 399 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 CtifQ6PEE2 600 aaKnown RBP9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Olfr1046Q7TR79 316 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gpc2Q8BKV1 579 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 EmsyQ8BMB0 1264 aaKnown RBP9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Klhl7Q8BUL5 586 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 D630039A03RikQ8K0M7 236 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Snrnp25Q8VIK1 123 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Afg3l1Q920A7 789 aaKnown RBP9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 AdarQ99MU3 1178 aaKnown RBP9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Cox16Q9CR63 106 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 GOLGA7BQ9D428 167 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 1700123K08RikQ9D991 295 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Msl3Q9WVG9 525 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Arid3bQ9Z1N7 568 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Cntnap5aQ0V8T9 1304 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ralgapa2A3KGS3 1872 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Dock3Q8CIQ7 2027 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Tldc2A2ACG1 198 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Kcng1A2BDX4 514 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Zfp990B1AVN5 605 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Xpnpep3B7ZMP1 506 aaKnown RBP9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Myo1eE9Q634 1107 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Pitpnm1O35954 1243 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Vmn2r1O70410 912 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Mucl2P02815 138 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Abcb1bP06795 1276 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Fam193bQ3U2K0 892 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 P3h1Q3V1T4 739 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Znf532Q6NXK2 1036 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 AdalQ80SY6 360 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Wdtc1Q80ZK9 677 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Q80ZQ3 298 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Rd3Q8BRE0 195 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Amz1Q8BVF9 502 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Il33Q8BVZ5 266 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gm5591Q8CDK1 855 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Q8CEZ4 452 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Vwa1Q8R2Z5 415 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Tspan3Q9QY33 253 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 CenphQ9QYM8 241 aa9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Tjp2Q9Z0U1 1167 aaKnown RBP9.23□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ttc3O88196 1979 aaKnown RBP9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Zfp174B9EJW5 407 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 DgkiD3YWQ0 1071 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Zfr2E9Q5M4 874 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 XntrpcF8VQM8 1264 aa9.22□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 42.3 ms