RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Thoc5Q8BKT7 683 aaKnown RBP17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Kcns3Q8BQZ8 491 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Hat1Q8BY71 416 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Jph2Q9ET78 696 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Mbl1P39039 239 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Lins1Q3U1D0 764 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Als2clQ60I26 952 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Cd180Q62192 661 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Tshz2Q68FE9 1030 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Q8C6G1 249 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Fam192aQ91WE2 254 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Pcdhgc5Q91XW9 944 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 NelfcdQ922L6 591 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Neu2Q9JMH3 379 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Arhgef28P97433 1693 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 AgtP11859 477 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Ankrd27Q3UMR0 1048 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Nlrp9cQ66X01 1004 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 OatP29758 439 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Cct8P42932 548 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Tc2nQ91XT6 489 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Ces1bD3Z5G7 567 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Fam83bQ0VBM2 1012 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Tmprss11aQ3UQ41 389 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Ccdc85aQ5SP85 500 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Oca2Q62052 833 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Trim45Q6PFY8 580 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Usp38Q8BW70 1042 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Fam45aQ9D8N2 357 aa17.27■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 WlsQ6DID7 541 aa17.27■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Pdlim2Q8R1G6 349 aa17.27■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Oas1dQ8VI95 361 aa17.27■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Haus8Q99L00 373 aa17.27■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 S100a13P97352 98 aa17.27■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Fam8a1Q3URQ4 399 aa17.27■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Abca6Q8K441 1624 aa17.27■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Zfp277E9Q6D6 583 aaKnown RBP17.27■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 CflarO35732 481 aa17.27■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Lilrb4Q64281 335 aa17.27■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Srrm3Q80WV7 648 aa17.27■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Mtrf1Q8K126 446 aa17.27■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Gtf2a1lQ8R4I4 468 aa17.27■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Slfn1Q9Z0I7 337 aa17.27■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Gm3252E9PUT9 216 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Gm2956E9PVJ0 216 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Gm3002E9PW72 216 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Gm3468E9QAJ8 216 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Gm8108K7N734 216 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Gm3739L7N296 216 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Gm3164L7N2B9 238 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Gm3488M0QW81 238 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Lrfn2Q80TG9 788 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Rmnd5aQ80YQ8 391 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Kbtbd13Q8C828 458 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Oas1cQ924S2 362 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Tex44Q9DA60 530 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 PigbQ9JJQ0 542 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Grin2dQ03391 1323 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Scgb2b11A0A087WR49 112 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Dsg3O35902 993 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Ces3aQ63880 571 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Ces3bQ8VCU1 571 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Zfyve9A2A8R0 1397 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Olfr1354E9Q5G9 310 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Rcn1Q05186 325 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Tssk1bQ61241 365 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Scd4Q6T707 353 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Abhd2Q9QXM0 425 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 CrymO54983 313 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 DcpsQ9DAR7 338 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Patl2A2ARM1 529 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Vmn2r87E9PZX4 848 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Gm8298J3QPI0 401 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Gsta3P30115 221 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Glt8d2Q640P4 349 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 ZfatQ7TS63 1237 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Haus3Q8QZX2 570 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Neurl4Q5NCX5 1563 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Pou4f1P17208 421 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Atg9bQ6EBV9 922 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Tmc4Q7TQ65 694 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Ccdc63Q8CDV6 558 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Serpina3nQ91WP6 418 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Ppp2r3cQ9JK24 453 aa17.26■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Fam180aQ8BR21 173 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Rhpn2Q8BWR8 686 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Ascc2Q91WR3 749 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Dhx30Q99PU8 1217 aaKnown RBP17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 1700123K08RikQ9D991 295 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Mrps15Q9DC71 258 aaKnown RBP17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Sf3b1Q99NB9 1304 aaKnown RBP17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Myh13B1AR69 1938 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Lcn6A2AJB9 181 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Skint11A7XV14 364 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Angpt2O35608 496 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 CcnoP0C242 352 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Lmnb1P14733 588 aaKnown RBP17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Olfr121Q5CZY0 321 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Wnk4Q80UE6 1222 aa17.25■□□□□ 0.35
Ccdc88a-201ENSMUST00000040182 Ifi44Q8BV66 422 aa17.25■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms