RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Gm4758L7N258 96 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Fgf15O35622 218 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Phka1P18826 1241 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 HdcP23738 662 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 TxkP42682 527 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Hsd17b2P51658 381 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Rad54lP70270 747 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 GsapQ3TCV3 858 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Tmem63bQ3TWI9 832 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 GnasQ6R0H7 1133 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Impg2Q80XH2 1243 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Znf76Q8BMU0 568 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Exd1Q8CDF7 570 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Defb15Q8R2I5 79 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 1700013H16RikQ9DAC5 291 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Olr1Q9EQ09 363 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Sucla2Q9Z2I9 463 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 2210011C24RikA0A087WQ89 206 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Lrrc63A6H694 637 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Anxa8O35640 327 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Runx2Q08775 607 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 B3gnt3Q5JCS9 372 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Grik1Q60934 836 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 2700097O09RikQ6PGK3 301 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Ipo5Q8BKC5 1097 aaKnown RBP14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 EtnpplQ8BWU8 499 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Snx30Q8CE50 437 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Vps37bQ8R0J7 285 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Atp5c1Q91VR2 298 aaKnown RBP14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 AslQ91YI0 464 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 NelfcdQ922L6 591 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Ankef1Q9D2J7 775 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Q9D2Q3 444 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Olig1Q9JKN5 260 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Tjp3Q9QXY1 905 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Plod1Q9R0E2 728 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Ror2Q9Z138 944 aa14.14□□□□□ -0.15
Nup88-201ENSMUST00000035283 Gm15448F6PZL4 682 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Galnt4O08832 578 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Ift81O35594 676 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Ifnar2O35664 513 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 BtkP35991 659 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 VcpQ01853 806 aaKnown RBP14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Pou6f1Q07916 301 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Znf112Q0VAW7 879 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 DselQ0VBN2 1207 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Ccdc127Q3TC33 260 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Slc17a7Q3TXX4 560 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Ppp1r12cQ3UMT1 782 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Tfcp2l1Q3UNW5 479 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Lipo3Q3UT41 399 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Atp4aQ64436 1033 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Tas2r109Q7M707 316 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 CyldQ80TQ2 952 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Chn2Q80XD1 332 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Camta2Q80Y50 1208 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Smtnl2Q8CI12 456 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Stx18Q8VDS8 334 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 YarsQ91WQ3 528 aaKnown RBP14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Mettl16Q9CQG2 553 aaKnown RBP14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Arhgef25Q9CWR0 618 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Tmem206Q9D771 350 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Txnrd2Q9JLT4 524 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Asb1Q9WV74 336 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Robo3Q9Z2I4 1366 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Tldc2A2ACG1 198 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Srpk1O70551 648 aaKnown RBP14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Axin2O88566 840 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Rab20P35295 233 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Nub1P54729 614 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 NcstnP57716 708 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Crnkl1P63154 690 aaKnown RBP14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Slc24a2Q14BI1 711 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Fdxacb1Q3UY23 622 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 XiapQ60989 496 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Spa17Q62252 149 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Btbd10Q80X66 475 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Znf618Q80YY7 953 aaKnown RBP14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Pcdha2Q91Y17 948 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Kifc1Q9QWT9 674 aa14.13□□□□□ -0.15
Nup88-201ENSMUST00000035283 Tubb1A2AQ07 451 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Morc3F7BJB9 942 aaKnown RBP14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 InhbeO08717 350 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Pias1O88907 651 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Rps6P62754 249 aaKnown RBP14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Cntn3Q07409 1028 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Pgrmc2Q80UU9 217 aaKnown RBP14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Tbc1d22bQ80VE5 505 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Usp37Q8C0R0 979 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Slc18a1Q8R090 521 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Nr3c2Q8VII8 978 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Taf7lQ9D3R9 471 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 FibpQ9JI19 357 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Gbp2Q9Z0E6 589 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Nrxn2E9Q7X7 1710 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Gm16430A6X8J1 155 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Lipo2D3YY49 398 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Ppargc1aO70343 797 aa14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Shoc2O88520 582 aaKnown RBP14.12□□□□□ -0.15
Nup88-201ENSMUST00000035283 Gnat1P20612 350 aa14.12□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 63.2 ms