RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Gm1141B9EJU1 475 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Cd68P31996 326 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Sash1P59808 1230 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Spink5Q148R4 1017 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Rgl2Q61193 778 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Zcwpw1Q6IR42 630 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Snx19Q6P4T1 997 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 PimregQ8BFY7 231 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Znf445Q8R2V3 986 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Pcdhb12Q91Y07 789 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Catsper1Q91ZR5 686 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Dnaaf1Q9D2H9 634 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Krt27Q9Z320 448 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Arhgef10lA2AWP8 1280 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Vmn2r63E9Q0K5 859 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Gm9268E9Q0M3 861 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Vmn2r62K7N712 859 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 EsrraO08580 422 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Eif3eP60229 445 aaKnown RBP11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ogfod1Q3U0K8 545 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Grb10Q60760 621 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Stip1Q60864 543 aaKnown RBP11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Tmco6Q8BQX5 494 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Slc7a14Q8BXR1 771 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Pnma1Q8C1C8 353 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ssx2ipQ8VC66 615 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ptf1aQ9QX98 324 aa11.88□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Tigd5Q499M4 642 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Znf467Q8JZL0 594 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ppp1r16bQ8VHQ3 568 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Nt5c1bQ91YE9 573 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Hic1Q9R1Y5 733 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Mpp2Q9WV34 552 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Grik3B1AS29 919 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Atp6v1b2P62814 511 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 InscQ3HNM7 579 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Lrch2Q3UMG5 773 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Spag6Q3V0U9 509 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ptger2Q62053 362 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Pla2g4cQ64GA5 597 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ahcyl1Q80SW1 530 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Nat14Q8BVG8 206 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Hdac7Q8C2B3 938 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Tmem206Q9D771 350 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Abcg8Q9DBM0 673 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Myoz2Q9JJW5 264 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Myh15E9Q264 1925 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 NesQ6P5H2 1864 aaKnown RBP11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Als2Q920R0 1651 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ppp1r36D3Z0R2 411 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Pitpnm1O35954 1243 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Rasgrf2P70392 1189 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Chi3l1Q61362 389 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Dync1li2Q6PDL0 492 aaKnown RBP11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Gprasp2Q8BUY8 826 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Clptm1Q8VBZ3 664 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 4921530L21RikQ9CQ47 274 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Rps6ka4Q9Z2B9 773 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Klf6O08584 283 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Mmp15O54732 657 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 BtkP35991 659 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Cdc25cP48967 447 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Zbtb14Q08376 449 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Atp2a3Q64518 1038 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Prpf38bQ80SY5 542 aaKnown RBP11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Gpr101Q80T62 511 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Sap130Q8BIH0 1057 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Dnali1Q8BVN8 258 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Wrap53Q8VC51 532 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Fam114a2Q8VE88 497 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Tssk3Q9D2E1 268 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Tjap1Q9DCD5 539 aa11.87□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Gad2P48320 585 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Usp10P52479 792 aaKnown RBP11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Slc17a8Q8BFU8 601 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Atg16l1Q8C0J2 607 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Dnajc9Q91WN1 259 aaKnown RBP11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ing2Q9ESK4 281 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 C87977A2A958 498 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Wdr95D3Z7A8 784 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Tac1P41539 130 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Elk3P41971 409 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Psmc1P62192 440 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Atp13a3Q5XF89 1219 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Ankrd6Q69ZU8 712 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Q8BGC1 442 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Pcmtd2Q8BHD8 359 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Exoc7O35250 697 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 EporP14753 507 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Uchl4P58321 233 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Grm2Q14BI2 872 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Cyp2j11Q3UNV2 504 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Gm29609Q3UU56 907 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Kiaa0319Q5SZV5 1081 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Psd2Q6P1I6 770 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Impg2Q80XH2 1243 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Gtf3c2Q8BL74 907 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Dppa3Q8QZY3 150 aa11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 AenQ9CZI9 336 aaKnown RBP11.86□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Pdpk1Q9Z2A0 559 aa11.86□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms