RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Cdh8P97291 799 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Xlr3cQ61806 226 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Snx19Q6P4T1 997 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Mrgprb8Q7TN51 330 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Wnk4Q80UE6 1222 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Wasf2Q8BH43 497 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Senp7Q8BUH8 1037 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 VcpkmtQ8C436 228 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Dclre1bQ8C7W7 541 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Spon1Q8VCC9 807 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Abcg3Q99P81 650 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Rpa3Q9CQ71 121 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Nudt12Q9DCN1 462 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Adrm1Q9JKV1 407 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Dnajc12Q9R022 198 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Fam205aA2APU8 1308 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Veph1A1A535 833 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ccdc13D3YV10 709 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Zfp266E9Q2S7 604 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Chrna9G3X8Z7 479 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Sptlc1O35704 473 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Il2rbP16297 539 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Rps6ka3P18654 740 aaKnown RBP11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Bmp2P21274 394 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 UrosP51163 265 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Uchl4P58321 233 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Irf6P97431 467 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 ItkQ03526 625 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Rufy4Q3TYX8 563 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Rps6ka6Q7TPS0 764 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 DolkQ8R2Y3 534 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 AslQ91YI0 464 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Taf11Q99JX1 211 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Pdxdc1Q99K01 787 aaKnown RBP11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Cttnbp2nlQ99LJ0 638 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 StambpQ9CQ26 424 aa11.42□□□□□ -0.58
Msh3-201ENSMUST00000022220 Maml3D4QGC2 1135 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Vav2Q60992 868 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 LbpQ61805 481 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Cyp2c29Q64458 490 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Lig4Q8BTF7 911 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Actl9Q8CG27 415 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 PdgfcQ8CI19 345 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 DaglbQ91WC9 669 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 F11Q91Y47 624 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Sytl1Q99N80 567 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ice1E9Q286 2241 aaKnown RBP11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Cntnap5cQ0V8T7 1305 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Zscan4-ps3A0A1B0GRH6 506 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Zscan4-ps2A0A1C7CYU6 506 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Fmr1P35922 614 aaKnown RBP11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 SftpdP50404 374 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Shox2P70390 331 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 NogP97466 232 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ankmy2Q3TPE9 440 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Map3k9Q3U1V8 1077 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Zbtb16Q3UQ17 673 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Syce2Q505B8 171 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Armcx2Q6A058 784 aaKnown RBP11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Kif11Q6P9P6 1052 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 C2cd5Q7TPS5 1016 aaKnown RBP11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Gpr180Q8BPS4 441 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ppfia2Q8BSS9 1257 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Mrps22Q9CXW2 359 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Maged2Q9ER67 616 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Tnfrsf10bQ9QZM4 381 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Plod1Q9R0E2 728 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Bub1bQ9Z1S0 1052 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Tbc1d16A2ABG4 766 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Gas1Q01721 343 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Calb2Q08331 271 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Gsdmc4Q3TR54 480 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Celf6Q7TN33 460 aaKnown RBP11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Tarsl2Q8BLY2 790 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Sugp1Q8CH02 643 aaKnown RBP11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Cuedc2Q9CXX9 284 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Apol7bB1AQP7 369 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Tnfrsf11aO35305 625 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 ZfxP17012 799 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Gja8P28236 440 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 VdrP48281 422 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Cyp2c39P56656 490 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Apol7eQ3UZ24 369 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ifnl2Q4VK74 193 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ndufaf2Q59J78 168 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Q6DFW0 481 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Tmem130Q6NXM3 419 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Moxd2Q7TT41 619 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ddhd1Q80YA3 547 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Slc38a7Q8BWH0 463 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 HyiQ8R1F5 277 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Snap47Q8R570 413 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Tmco4Q91WU4 631 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Pcdha10Q91Y20 946 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Rassf3Q99P51 232 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Lpin2Q99PI5 893 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ecel1Q9JMI0 775 aa11.41□□□□□ -0.58
Msh3-201ENSMUST00000022220 Abca15E9PWH4 1668 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 Syngap1F6SEU4 1340 aa11.4□□□□□ -0.58
Msh3-201ENSMUST00000022220 B020011L13RikA0A087WQI7 412 aa11.4□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms